BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041715
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   145   3e-33
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   130   8e-29
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   128   4e-28
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   128   4e-28
ref|NP_174294.1| Intron maturase, type II-like protein [Arabidop...   123   1e-26

>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/94 (71%), Positives = 78/94 (82%)
 Frame = -2

Query: 283 NQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSCA 104
           +Q+  +++DP+SLMKEDPIQVCS LW ++FS+    PFSNLTGFL KFDLWVLAYQRSCA
Sbjct: 31  HQEREQEQDPYSLMKEDPIQVCSSLWVRSFSNQTHAPFSNLTGFLSKFDLWVLAYQRSCA 90

Query: 103 EETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVW 2
             TGSFPPRNAIH  VLRDLLSLQ AV+ G+F W
Sbjct: 91  HFTGSFPPRNAIHSQVLRDLLSLQNAVVRGRFSW 124


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  130 bits (328), Expect = 8e-29
 Identities = 62/98 (63%), Positives = 73/98 (74%)
 Frame = -2

Query: 295 SQPQNQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQ 116
           SQP NQ +    DPHSLMK+DPI++C+ LW KTFS S T  F NLTGFL  FDLW+LAYQ
Sbjct: 29  SQPPNQNQ----DPHSLMKQDPIEICTSLWVKTFSSSTTS-FPNLTGFLSNFDLWLLAYQ 83

Query: 115 RSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVW 2
           RSCA  TG+FPPRNA+H  VL  LLSL+ AV+  +F W
Sbjct: 84  RSCAHATGTFPPRNAVHATVLHSLLSLRNAVIRNRFEW 121


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/95 (61%), Positives = 72/95 (75%)
 Frame = -2

Query: 286 QNQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSC 107
           QN      +DP+S +KEDPI +CS +W K F+      FS+L+ FL KFDLWVLAYQRSC
Sbjct: 46  QNPPHLHDEDPYSHLKEDPIDICSSIWLKAFASLPNSSFSHLSSFLSKFDLWVLAYQRSC 105

Query: 106 AEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVW 2
           A+ TG+FPPRNAIH +VLRDLLSL+ AV+NG+F W
Sbjct: 106 ADLTGNFPPRNAIHSHVLRDLLSLRNAVINGKFSW 140


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/95 (61%), Positives = 72/95 (75%)
 Frame = -2

Query: 286 QNQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSC 107
           QN      +DP+S +KEDPI +CS +W K F+      FS+L+ FL KFDLWVLAYQRSC
Sbjct: 46  QNPPHLHDEDPYSHLKEDPIDICSSIWLKAFASLPNSSFSHLSSFLSKFDLWVLAYQRSC 105

Query: 106 AEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVW 2
           A+ TG+FPPRNAIH +VLRDLLSL+ AV+NG+F W
Sbjct: 106 ADLTGNFPPRNAIHSHVLRDLLSLRNAVINGKFSW 140


>ref|NP_174294.1| Intron maturase, type II-like protein [Arabidopsis thaliana]
           gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
           35070-37205 [Arabidopsis thaliana]
           gi|332193046|gb|AEE31167.1| Intron maturase, type
           II-like protein [Arabidopsis thaliana]
          Length = 711

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
 Frame = -2

Query: 286 QNQQERKQKDPHSLMKEDPIQVCSDLWFKTFSDSITKPFSNLTGFLKKFDLWVLAYQRSC 107
           ++++    +DP+SL+K+DP+ +C  LW K+FS   +  FSNLTGFL KFDLWVLAYQR+C
Sbjct: 39  ESREPSSTQDPYSLLKQDPVDICLSLWVKSFSSPPSATFSNLTGFLSKFDLWVLAYQRTC 98

Query: 106 AEETGSFPPRNAIHFNVLRDLLSLQTAVL--NGQFVW 2
           A  TG+FPPRNAIH N LR LLSLQ AV    G+F W
Sbjct: 99  AHVTGTFPPRNAIHANALRSLLSLQNAVTRSGGKFRW 135