BLASTX nr result

ID: Coptis25_contig00041698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041698
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147349.1| PREDICTED: uncharacterized protein LOC101214...   279   5e-73
ref|XP_002262727.1| PREDICTED: uncharacterized protein LOC100260...   277   2e-72
ref|XP_002526641.1| conserved hypothetical protein [Ricinus comm...   271   1e-70
gb|AFK35925.1| unknown [Lotus japonicus]                              270   3e-70
ref|XP_003630277.1| hypothetical protein MTR_8g093750 [Medicago ...   266   5e-69

>ref|XP_004147349.1| PREDICTED: uncharacterized protein LOC101214268 [Cucumis sativus]
           gi|449513305|ref|XP_004164290.1| PREDICTED:
           uncharacterized protein LOC101227824 [Cucumis sativus]
          Length = 234

 Score =  279 bits (714), Expect = 5e-73
 Identities = 148/227 (65%), Positives = 176/227 (77%), Gaps = 10/227 (4%)
 Frame = +2

Query: 53  HLLL-SSTSKLQNP---------KPLQRPNLKTHSTITRRSIFLLTLPTISTSLVLLPTL 202
           HLLL SS+S   NP         KPL  PN   H+++  R + L +LP  +  L+ +P  
Sbjct: 12  HLLLPSSSSSSHNPSTNTRTKSSKPLSFPN---HNSLPTRRLLLFSLPIATAFLLPIPGN 68

Query: 203 NLPPFSFALVTDQFDPVTTEEKDASASVSKRVLKAIELLDKGRELQAHGDFTHALDYFSQ 382
            + P S +   + FDPV+  EKDASA++S+RV +A+ELLDKGRELQA GDF  AL YF+Q
Sbjct: 69  PIQPSS-SFAVESFDPVSRSEKDASAAISRRVSEAVELLDKGRELQALGDFNQALLYFTQ 127

Query: 383 VVSNYKEFAFSDYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDK 562
           V+  YK+FAFSDYARVGRALALYE+GDREEAIAEMEDVSISLKGYPEVHAALAAALYVDK
Sbjct: 128 VIDKYKDFAFSDYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDK 187

Query: 563 NAPLLAENQFAIATLLDPHYTDLTYVREKKHWPPSLVSSLQHFITLS 703
           +A LLAENQF IATLLDPHY D++YV+E KHWPPSL+SSLQHF+TLS
Sbjct: 188 HAALLAENQFTIATLLDPHYVDISYVKETKHWPPSLISSLQHFLTLS 234


>ref|XP_002262727.1| PREDICTED: uncharacterized protein LOC100260231 [Vitis vinifera]
           gi|296088538|emb|CBI37529.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  277 bits (709), Expect = 2e-72
 Identities = 150/225 (66%), Positives = 173/225 (76%)
 Frame = +2

Query: 29  ACKAPIFNHLLLSSTSKLQNPKPLQRPNLKTHSTITRRSIFLLTLPTISTSLVLLPTLNL 208
           ACK P  +  LL +    + P P+++      S+  RR +       ISTS +L+  L  
Sbjct: 3   ACKVPPISCFLLPTPPNCKTPIPIRQK--LNPSSPNRRGLL------ISTSSLLVVLLPP 54

Query: 209 PPFSFALVTDQFDPVTTEEKDASASVSKRVLKAIELLDKGRELQAHGDFTHALDYFSQVV 388
           P  S AL T  FDPV+  E+DASA VS+RV +A+ LL+KGRELQA GDF  AL YF+QVV
Sbjct: 55  PTSSSALPT--FDPVSPNERDASADVSQRVSEAVSLLEKGRELQAQGDFERALQYFTQVV 112

Query: 389 SNYKEFAFSDYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEVHAALAAALYVDKNA 568
           +NYK+FAFSDYARVGRALALYEVGDR+EAIAEMEDVSISLKGYPEVHAALAAALY DK+A
Sbjct: 113 NNYKDFAFSDYARVGRALALYEVGDRQEAIAEMEDVSISLKGYPEVHAALAAALYADKHA 172

Query: 569 PLLAENQFAIATLLDPHYTDLTYVREKKHWPPSLVSSLQHFITLS 703
           PLLAENQF IATLLDPHYTD+ YVRE KHWPPSL+SSLQHFITLS
Sbjct: 173 PLLAENQFTIATLLDPHYTDIAYVRETKHWPPSLISSLQHFITLS 217


>ref|XP_002526641.1| conserved hypothetical protein [Ricinus communis]
           gi|223534033|gb|EEF35753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 227

 Score =  271 bits (693), Expect = 1e-70
 Identities = 153/239 (64%), Positives = 181/239 (75%), Gaps = 9/239 (3%)
 Frame = +2

Query: 14  SVMVFACKAPIFNHLLLSSTSKLQNPKPLQRPNLKTHSTITRRSIFLLTLP------TIS 175
           S  + ACKAPI +         LQ P     PN + +S  TRR  FL +LP      T +
Sbjct: 2   SARMGACKAPICH---------LQRPSSPSTPNPR-NSNSTRR-FFLFSLPLCATCATTT 50

Query: 176 TSLVLL---PTLNLPPFSFALVTDQFDPVTTEEKDASASVSKRVLKAIELLDKGRELQAH 346
           T+LVL    PT+ + PF    + + +DPV+  EKDASA+ S+RV +AI LL+KGRELQA 
Sbjct: 51  TTLVLTQSSPTVKVEPF--LALAESYDPVSQAEKDASANKSQRVSEAIGLLEKGRELQAQ 108

Query: 347 GDFTHALDYFSQVVSNYKEFAFSDYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEV 526
           GDF+ AL YF+ VV NYK+FAFS+YARVGRALALYEVGD++EAIAEMEDVSISLKGYPEV
Sbjct: 109 GDFSAALPYFTLVVENYKDFAFSEYARVGRALALYEVGDKQEAIAEMEDVSISLKGYPEV 168

Query: 527 HAALAAALYVDKNAPLLAENQFAIATLLDPHYTDLTYVREKKHWPPSLVSSLQHFITLS 703
           HAALAAALYVDK+APLLAENQF IATLLDPHYTD++YV+E KHWPPSLVSSL+ FITLS
Sbjct: 169 HAALAAALYVDKHAPLLAENQFTIATLLDPHYTDISYVKETKHWPPSLVSSLKRFITLS 227


>gb|AFK35925.1| unknown [Lotus japonicus]
          Length = 219

 Score =  270 bits (690), Expect = 3e-70
 Identities = 149/235 (63%), Positives = 176/235 (74%), Gaps = 7/235 (2%)
 Frame = +2

Query: 20  MVFACKAPIFNHLLLSSTSKLQNPKPL--QRPNLKTHSTITR-----RSIFLLTLPTIST 178
           MV AC+AP  ++L         NPKP    + +  T   I+R     R + LL+LP   +
Sbjct: 1   MVAACRAPPISYL------SPPNPKPRIQSKSSSSTSPPISRVQFPNRRLLLLSLPL--S 52

Query: 179 SLVLLPTLNLPPFSFALVTDQFDPVTTEEKDASASVSKRVLKAIELLDKGRELQAHGDFT 358
             +LLP   +P F      +++DPVT  E+DASA +S+RV K +ELL+KGRELQA GDF 
Sbjct: 53  GFLLLP---VPAFG-----EEYDPVTAPERDASALISQRVAKGVELLEKGRELQAQGDFN 104

Query: 359 HALDYFSQVVSNYKEFAFSDYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEVHAAL 538
            ALDYFSQV+ +YK+ AFS+YARVGRAL LYEVGDRE+AIAEMEDVSISLKGYPEVHAAL
Sbjct: 105 GALDYFSQVIDSYKDLAFSEYARVGRALVLYEVGDREQAIAEMEDVSISLKGYPEVHAAL 164

Query: 539 AAALYVDKNAPLLAENQFAIATLLDPHYTDLTYVREKKHWPPSLVSSLQHFITLS 703
           AAALY DK+APLLAENQF IATLLDPH+TDL+YVR  KHWPPSLVSSLQHFITLS
Sbjct: 165 AAALYSDKHAPLLAENQFTIATLLDPHFTDLSYVRNTKHWPPSLVSSLQHFITLS 219


>ref|XP_003630277.1| hypothetical protein MTR_8g093750 [Medicago truncatula]
           gi|355524299|gb|AET04753.1| hypothetical protein
           MTR_8g093750 [Medicago truncatula]
          Length = 229

 Score =  266 bits (680), Expect = 5e-69
 Identities = 146/240 (60%), Positives = 181/240 (75%), Gaps = 12/240 (5%)
 Frame = +2

Query: 20  MVFACKA---PIFNHLLLSSTSKLQNPKPLQRPNL----KT---HSTITRRSIFLLTLPT 169
           MV AC+A   P  +HL       L+NPK ++  N     KT    + ++ R +FL ++P 
Sbjct: 1   MVGACRAVAAPPISHL------PLRNPKTIRIKNSCHQNKTKAFRAQLSNRRLFLFSIPL 54

Query: 170 ISTSLVLLPTLNLPPF--SFALVTDQFDPVTTEEKDASASVSKRVLKAIELLDKGRELQA 343
             +S + LP    P F    ++++ ++DPVT  E+DASA +S+RV + +ELL+KGRELQA
Sbjct: 55  --SSFIFLP---FPAFCEGDSVISQEYDPVTRSERDASALISQRVSRGVELLEKGRELQA 109

Query: 344 HGDFTHALDYFSQVVSNYKEFAFSDYARVGRALALYEVGDREEAIAEMEDVSISLKGYPE 523
            GDF  AL YFSQV+ +YK+ AFS+YARVGRALALYE+GDREEAIAEMEDVSISLKGYPE
Sbjct: 110 LGDFNGALQYFSQVIESYKDLAFSEYARVGRALALYEIGDREEAIAEMEDVSISLKGYPE 169

Query: 524 VHAALAAALYVDKNAPLLAENQFAIATLLDPHYTDLTYVREKKHWPPSLVSSLQHFITLS 703
           VHAALAAALY DK+A LLAENQF IATLLDPH+TDL+YVR+ KHWPPSL+SSLQHFITLS
Sbjct: 170 VHAALAAALYADKHAALLAENQFTIATLLDPHFTDLSYVRDTKHWPPSLISSLQHFITLS 229


Top