BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041695
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090381.1| NADH dehydrogenase subunit 4 (mitochondrion)...   143   2e-32
ref|YP_006291798.1| nad4 gene product (mitochondrion) [Daucus ca...   141   5e-32
ref|YP_006280924.1| NADH dehydrogenase subunit 4 (mitochondrion)...   140   8e-32
gb|AFR34311.1| NADH dehydrogenase subunit 4 (mitochondrion) [Gly...   140   1e-31
ref|YP_004222811.1| NADH dehydrogenase subunit 4 [Vigna radiata]...   140   1e-31

>ref|YP_005090381.1| NADH dehydrogenase subunit 4 (mitochondrion) [Phoenix dactylifera]
           gi|343478433|gb|AEM43921.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Phoenix dactylifera]
          Length = 495

 Score =  143 bits (360), Expect = 2e-32
 Identities = 75/84 (89%), Positives = 76/84 (90%), Gaps = 3/84 (3%)
 Frame = -2

Query: 243 AIPLILLQTGTTNLQISLTTEFSERRQIFLWIASFA---VKVPMVPVHIWSLEAHVEAPM 73
           AIPLILLQTGTT+ QI LTTEFSERRQIFLWIASFA   VKVPMVPVHIW  EAHVEAP 
Sbjct: 187 AIPLILLQTGTTDSQILLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPT 246

Query: 72  AGSVILAGIPSKLGTHGFLRFSIP 1
           AGSVILAGIPSKLGTHGFLRFSIP
Sbjct: 247 AGSVILAGIPSKLGTHGFLRFSIP 270


>ref|YP_006291798.1| nad4 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374082014|gb|AEY81206.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Daucus carota subsp. sativus]
          Length = 495

 Score =  141 bits (356), Expect = 5e-32
 Identities = 75/84 (89%), Positives = 77/84 (91%), Gaps = 3/84 (3%)
 Frame = -2

Query: 243 AIPLILLQTGTTNLQISLTTEFSERRQIFLWIASFA---VKVPMVPVHIWSLEAHVEAPM 73
           AI LILLQTGTT+LQISLTTEFSERRQIFLWIASFA   VKVPMVPVHIWS EAHVEAP 
Sbjct: 187 AILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWSPEAHVEAPT 246

Query: 72  AGSVILAGIPSKLGTHGFLRFSIP 1
           AGSVILAGIP KLGT+GFLRFSIP
Sbjct: 247 AGSVILAGIPLKLGTYGFLRFSIP 270


>ref|YP_006280924.1| NADH dehydrogenase subunit 4 (mitochondrion) [Spirodela polyrhiza]
           gi|385252625|gb|AFI54933.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Spirodela polyrhiza]
          Length = 493

 Score =  140 bits (354), Expect = 8e-32
 Identities = 74/84 (88%), Positives = 75/84 (89%), Gaps = 3/84 (3%)
 Frame = -2

Query: 243 AIPLILLQTGTTNLQISLTTEFSERRQIFLWIASFA---VKVPMVPVHIWSLEAHVEAPM 73
           AIPLILLQTGTT+ QI LTTEFSERRQIFLWIASFA   VKVPMVPVHIW  EAHVEAP 
Sbjct: 186 AIPLILLQTGTTDSQILLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPT 245

Query: 72  AGSVILAGIPSKLGTHGFLRFSIP 1
           AGSVILAGIP KLGTHGFLRFSIP
Sbjct: 246 AGSVILAGIPLKLGTHGFLRFSIP 269


>gb|AFR34311.1| NADH dehydrogenase subunit 4 (mitochondrion) [Glycine max]
          Length = 495

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/84 (88%), Positives = 75/84 (89%), Gaps = 3/84 (3%)
 Frame = -2

Query: 243 AIPLILLQTGTTNLQISLTTEFSERRQIFLWIASFA---VKVPMVPVHIWSLEAHVEAPM 73
           AI LIL QTGT +LQISLTTEFSERRQIFLWIASFA   VKVPMVPVHIW  EAHVEAP 
Sbjct: 187 AILLILFQTGTADLQISLTTEFSERRQIFLWIASFAAFAVKVPMVPVHIWLPEAHVEAPT 246

Query: 72  AGSVILAGIPSKLGTHGFLRFSIP 1
           AGSVILAGIPSKLGTHGFLRFSIP
Sbjct: 247 AGSVILAGIPSKLGTHGFLRFSIP 270


>ref|YP_004222811.1| NADH dehydrogenase subunit 4 [Vigna radiata]
           gi|308206740|gb|ADO19877.1| NADH dehydrogenase subunit 4
           [Vigna radiata]
          Length = 495

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/84 (88%), Positives = 75/84 (89%), Gaps = 3/84 (3%)
 Frame = -2

Query: 243 AIPLILLQTGTTNLQISLTTEFSERRQIFLWIASFA---VKVPMVPVHIWSLEAHVEAPM 73
           AI LIL QTGT +LQISLTTEFSERRQIFLWIASFA   VKVPMVPVHIW  EAHVEAP 
Sbjct: 187 AILLILFQTGTADLQISLTTEFSERRQIFLWIASFAAFAVKVPMVPVHIWLPEAHVEAPT 246

Query: 72  AGSVILAGIPSKLGTHGFLRFSIP 1
           AGSVILAGIPSKLGTHGFLRFSIP
Sbjct: 247 AGSVILAGIPSKLGTHGFLRFSIP 270