BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041692
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]         102   2e-20
ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|38...    85   5e-15
ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus s...    85   5e-15
gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]          84   1e-14
gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]         84   2e-14

>gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1]
          Length = 412

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
 Frame = -1

Query: 305 FNIQDFILDRCLFRVILSMMKG---WKMYSTTTDTVGRPFWLFDWHSKDTVCAWFPMEGN 135
           F I +F L+  LF  +L+++K    +K+ + TT+T+GRP WLFDWH    VCAWFP E N
Sbjct: 189 FGITNFTLNSNLFYGLLAILKERKEFKLSTLTTNTIGRPCWLFDWHDNVQVCAWFPREAN 248

Query: 134 YTLEDVCLAYIVGVACTPNLGPRDVDDWQDVTANSTFENFDRAE 3
           +  +DV  AYI+GVACTP LGP D D W+   + ++   F   E
Sbjct: 249 FNSQDVTAAYIIGVACTPKLGPSDDDAWKYYASLNSVPTFTPTE 292


>ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|388877113|emb|CCH50610.1|
           coat protein [Persimmon cryptic virus]
          Length = 415

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
 Frame = -1

Query: 305 FNIQDFILDRCLFRVILSMM----KGWKMYSTTTDTVGRPFWLFDWHSKDTVCAWFPMEG 138
           F I  + ++  L + +L +M      W+    + DT+GRP WL DW       AWFP E 
Sbjct: 200 FGINHYAINESLVQGLLDVMDLKNNTWRTVPLSHDTLGRPMWLLDWRQNQAY-AWFPQEN 258

Query: 137 NYTLEDVCLAYIVGVACTPNLGPRDVDDWQDVTAN 33
           +++ ED+  A+I+G+ C+P LGPRDVDDWQ    N
Sbjct: 259 HFSKEDLIAAHILGIPCSPRLGPRDVDDWQFFPGN 293


>ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus sativus cryptic virus 3]
           gi|217039789|gb|ACJ76982.1| hypothetical protein
           [Raphanus sativus cryptic virus 3]
          Length = 374

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
 Frame = -1

Query: 305 FNIQDFILDRCLFRVILSMMKGWKMYSTT---TDTVGRPFWLFDWHSKDTVCAWFPMEGN 135
           F I +++    LF  I++ MK  K ++     ++  GRP WLFDWH++D +CA F  EGN
Sbjct: 187 FGINNYVHQPELFSAIVATMKDRKKFNMVPLPSNYSGRPSWLFDWHAEDQICAPFQPEGN 246

Query: 134 YTLEDVCLAYIVGVACTPNLGPRDVDDWQ 48
           +  ED+ +A+++G ACT  +G RD DDWQ
Sbjct: 247 FNNEDIAMAFVLGTACTSLIGMRDRDDWQ 275


>gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2]
          Length = 430

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
 Frame = -1

Query: 239 WKMYSTTTDTVGRPFWLFDWH---SKDTVCAWFPMEGNYTLEDVCLAYIVGVACTPNLGP 69
           W++    TDT+GRP WL DWH   ++    AWFP EGNY++ED+   +I+G A TP +GP
Sbjct: 225 WRVEPLVTDTLGRPGWLLDWHQVGAQQQAYAWFPSEGNYSMEDLIAPHIIGEALTPLMGP 284

Query: 68  RDVDDWQDV-----TANSTFENFDR 9
            D+DDWQ        AN  ++N +R
Sbjct: 285 CDIDDWQYFPNFIRPANVPWQNMER 309


>gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1]
          Length = 324

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
 Frame = -1

Query: 305 FNIQDFILDRCLFRVILSMMKG----WKMYSTTTDTVGRPFWLFDWHSKDTVCAWFPMEG 138
           F + +F LD  +   IL++M      W     +T+T+GRP WLFD+       +WFPME 
Sbjct: 153 FGMNNFYLDENIVLAILNIMDAPRNDWNTVPLSTNTLGRPGWLFDYRLGKAY-SWFPMES 211

Query: 137 NYTLEDVCLAYIVGVACTPNLGPRDVDDWQ 48
           N++  D+   +I+G+ CTP LGPRDVDDWQ
Sbjct: 212 NFSRVDLIAPHILGIPCTPRLGPRDVDDWQ 241