BLASTX nr result
ID: Coptis25_contig00041692
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041692 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1] 102 2e-20 ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|38... 85 5e-15 ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus s... 85 5e-15 gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2] 84 1e-14 gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1] 84 2e-14 >gb|AEJ07891.1| putative coat protein [Pepper cryptic virus 1] Length = 412 Score = 102 bits (255), Expect = 2e-20 Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 3/104 (2%) Frame = -1 Query: 305 FNIQDFILDRCLFRVILSMMKG---WKMYSTTTDTVGRPFWLFDWHSKDTVCAWFPMEGN 135 F I +F L+ LF +L+++K +K+ + TT+T+GRP WLFDWH VCAWFP E N Sbjct: 189 FGITNFTLNSNLFYGLLAILKERKEFKLSTLTTNTIGRPCWLFDWHDNVQVCAWFPREAN 248 Query: 134 YTLEDVCLAYIVGVACTPNLGPRDVDDWQDVTANSTFENFDRAE 3 + +DV AYI+GVACTP LGP D D W+ + ++ F E Sbjct: 249 FNSQDVTAAYIIGVACTPKLGPSDDDAWKYYASLNSVPTFTPTE 292 >ref|YP_006390090.1| coat protein [Persimmon cryptic virus] gi|388877113|emb|CCH50610.1| coat protein [Persimmon cryptic virus] Length = 415 Score = 85.1 bits (209), Expect = 5e-15 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%) Frame = -1 Query: 305 FNIQDFILDRCLFRVILSMM----KGWKMYSTTTDTVGRPFWLFDWHSKDTVCAWFPMEG 138 F I + ++ L + +L +M W+ + DT+GRP WL DW AWFP E Sbjct: 200 FGINHYAINESLVQGLLDVMDLKNNTWRTVPLSHDTLGRPMWLLDWRQNQAY-AWFPQEN 258 Query: 137 NYTLEDVCLAYIVGVACTPNLGPRDVDDWQDVTAN 33 +++ ED+ A+I+G+ C+P LGPRDVDDWQ N Sbjct: 259 HFSKEDLIAAHILGIPCSPRLGPRDVDDWQFFPGN 293 >ref|YP_002364402.1| hypothetical protein RSCV3_s2gp1 [Raphanus sativus cryptic virus 3] gi|217039789|gb|ACJ76982.1| hypothetical protein [Raphanus sativus cryptic virus 3] Length = 374 Score = 85.1 bits (209), Expect = 5e-15 Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 3/89 (3%) Frame = -1 Query: 305 FNIQDFILDRCLFRVILSMMKGWKMYSTT---TDTVGRPFWLFDWHSKDTVCAWFPMEGN 135 F I +++ LF I++ MK K ++ ++ GRP WLFDWH++D +CA F EGN Sbjct: 187 FGINNYVHQPELFSAIVATMKDRKKFNMVPLPSNYSGRPSWLFDWHAEDQICAPFQPEGN 246 Query: 134 YTLEDVCLAYIVGVACTPNLGPRDVDDWQ 48 + ED+ +A+++G ACT +G RD DDWQ Sbjct: 247 FNNEDIAMAFVLGTACTSLIGMRDRDDWQ 275 >gb|AEJ07893.1| putative coat protein [Pepper cryptic virus 2] Length = 430 Score = 84.0 bits (206), Expect = 1e-14 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 8/85 (9%) Frame = -1 Query: 239 WKMYSTTTDTVGRPFWLFDWH---SKDTVCAWFPMEGNYTLEDVCLAYIVGVACTPNLGP 69 W++ TDT+GRP WL DWH ++ AWFP EGNY++ED+ +I+G A TP +GP Sbjct: 225 WRVEPLVTDTLGRPGWLLDWHQVGAQQQAYAWFPSEGNYSMEDLIAPHIIGEALTPLMGP 284 Query: 68 RDVDDWQDV-----TANSTFENFDR 9 D+DDWQ AN ++N +R Sbjct: 285 CDIDDWQYFPNFIRPANVPWQNMER 309 >gb|ACZ54927.1| hypothetical protein [Mulberry cryptic virus 1] Length = 324 Score = 83.6 bits (205), Expect = 2e-14 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 4/90 (4%) Frame = -1 Query: 305 FNIQDFILDRCLFRVILSMMKG----WKMYSTTTDTVGRPFWLFDWHSKDTVCAWFPMEG 138 F + +F LD + IL++M W +T+T+GRP WLFD+ +WFPME Sbjct: 153 FGMNNFYLDENIVLAILNIMDAPRNDWNTVPLSTNTLGRPGWLFDYRLGKAY-SWFPMES 211 Query: 137 NYTLEDVCLAYIVGVACTPNLGPRDVDDWQ 48 N++ D+ +I+G+ CTP LGPRDVDDWQ Sbjct: 212 NFSRVDLIAPHILGIPCTPRLGPRDVDDWQ 241