BLASTX nr result

ID: Coptis25_contig00041645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041645
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300677.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|NP_001234616.1| ornithine decarboxylase [Solanum lycopersicu...   181   4e-44
sp|P50134.1|DCOR_DATST RecName: Full=Ornithine decarboxylase; Sh...   181   5e-44
gb|AAG45222.1|AF323910_1 ornithine decarboxylase [Nicotiana glut...   180   1e-43
emb|CBX19979.1| ornithine decarboxylase [Nicotiana glauca]            179   2e-43

>ref|XP_002300677.1| predicted protein [Populus trichocarpa] gi|222842403|gb|EEE79950.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  182 bits (461), Expect = 3e-44
 Identities = 81/104 (77%), Positives = 93/104 (89%)
 Frame = -3

Query: 313 KRVRGELREYWVNDGIYGSLNCILFDHATVTATPLACKSDSTNPTCDGAKTYQSTVFGPT 134
           KRVRGELREYW+NDGIYGSLNCIL DHAT+T TPLAC S+S NPTC G K+Y S VFGPT
Sbjct: 266 KRVRGELREYWINDGIYGSLNCILNDHATITCTPLACNSNSANPTCKGEKSYSSMVFGPT 325

Query: 133 CDALDTILTDYKLPELEVNDWLVFPNVGAYTACAGSKFNGFDTS 2
           CDALDT+LT ++LPEL+V+DWLVFPN+GAYTA AGS FNGF+T+
Sbjct: 326 CDALDTVLTVHQLPELQVDDWLVFPNMGAYTAAAGSSFNGFNTA 369


>ref|NP_001234616.1| ornithine decarboxylase [Solanum lycopersicum]
           gi|75277325|sp|O22616.2|DCOR_SOLLC RecName:
           Full=Ornithine decarboxylase; Short=ODC; AltName:
           Full=LeODC gi|3668354|gb|AAC61845.1| ornithine
           decarboxylase [Solanum lycopersicum]
           gi|10937976|gb|AAB82301.2| ornithine decarboxylase
           [Solanum lycopersicum]
          Length = 431

 Score =  181 bits (460), Expect = 4e-44
 Identities = 78/104 (75%), Positives = 93/104 (89%)
 Frame = -3

Query: 313 KRVRGELREYWVNDGIYGSLNCILFDHATVTATPLACKSDSTNPTCDGAKTYQSTVFGPT 134
           KRVRGEL+EYW+NDG+YGS+NC+L+DHATVTATPLAC S+  N  C G+KT+ STVFGPT
Sbjct: 316 KRVRGELKEYWINDGLYGSMNCVLYDHATVTATPLACMSNRNNLNCGGSKTFPSTVFGPT 375

Query: 133 CDALDTILTDYKLPELEVNDWLVFPNVGAYTACAGSKFNGFDTS 2
           CDALDT+L DY+LPEL+VNDWL+FPN+GAYT  AGS FNGF+TS
Sbjct: 376 CDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTS 419


>sp|P50134.1|DCOR_DATST RecName: Full=Ornithine decarboxylase; Short=ODC
           gi|871008|emb|CAA61121.1| ornithine decarboxylase
           [Datura stramonium]
          Length = 431

 Score =  181 bits (459), Expect = 5e-44
 Identities = 78/104 (75%), Positives = 93/104 (89%)
 Frame = -3

Query: 313 KRVRGELREYWVNDGIYGSLNCILFDHATVTATPLACKSDSTNPTCDGAKTYQSTVFGPT 134
           KRVRGELREYW+NDG+YGS+NC+L+DHATV ATPLAC S+ +N  C G+KT+ STVFGPT
Sbjct: 316 KRVRGELREYWINDGLYGSMNCVLYDHATVNATPLACMSNRSNLNCGGSKTFPSTVFGPT 375

Query: 133 CDALDTILTDYKLPELEVNDWLVFPNVGAYTACAGSKFNGFDTS 2
           CDALDT+L DY+LPEL+VNDWL+FPN+GAYT  AGS FNGF+TS
Sbjct: 376 CDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTS 419


>gb|AAG45222.1|AF323910_1 ornithine decarboxylase [Nicotiana glutinosa]
          Length = 432

 Score =  180 bits (456), Expect = 1e-43
 Identities = 79/104 (75%), Positives = 93/104 (89%)
 Frame = -3

Query: 313 KRVRGELREYWVNDGIYGSLNCILFDHATVTATPLACKSDSTNPTCDGAKTYQSTVFGPT 134
           KRVRGELREYW+NDG+YGS+NC+L+DHATV ATPLA  S+ TN TC G+KT+ +TVFGPT
Sbjct: 317 KRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRTNVTCGGSKTFPTTVFGPT 376

Query: 133 CDALDTILTDYKLPELEVNDWLVFPNVGAYTACAGSKFNGFDTS 2
           CDALDT+L DY+LPEL+VNDWLVFPN+GAYT  AGS FNGF+TS
Sbjct: 377 CDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTS 420


>emb|CBX19979.1| ornithine decarboxylase [Nicotiana glauca]
          Length = 433

 Score =  179 bits (455), Expect = 2e-43
 Identities = 78/104 (75%), Positives = 94/104 (90%)
 Frame = -3

Query: 313 KRVRGELREYWVNDGIYGSLNCILFDHATVTATPLACKSDSTNPTCDGAKTYQSTVFGPT 134
           KRVRGELREYW+NDG+YGS+NC+L+DHATV ATPLA +S+ +N TC G+KT+ +TVFGPT
Sbjct: 318 KRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVQSNRSNVTCGGSKTFPTTVFGPT 377

Query: 133 CDALDTILTDYKLPELEVNDWLVFPNVGAYTACAGSKFNGFDTS 2
           CDALDT+L DY+LPEL+VNDWLVFPN+GAYT  AGS FNGF+TS
Sbjct: 378 CDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTS 421


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