BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041602
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28167.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...   126   2e-27
ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin...   119   3e-25
ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containin...   110   1e-22

>emb|CBI28167.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 11/106 (10%)
 Frame = -3

Query: 287 EECPFGDRCNYRHEDPRKFRETSV-------ISIRTTGPPIDDGPKTEQ----SDRSETV 141
           EECP+GDRCN+ HEDP+KFR+ S        ISI TTGPP++ G  +      S    ++
Sbjct: 59  EECPYGDRCNFLHEDPKKFRDDSARPRESFAISIGTTGPPMEHGSGSNLGSNLSSNLSSM 118

Query: 140 NSSVDGNWMNLKPASWKTKMCNKWETTGNCPFGDKCHFAHGQSELQ 3
           NS +D    N+KP  WKTK+C KWETTG+CPFG+KCHFAHGQ+ELQ
Sbjct: 119 NSGLDPFRGNVKPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQ 164


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Vitis vinifera]
          Length = 349

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 11/106 (10%)
 Frame = -3

Query: 287 EECPFGDRCNYRHEDPRKFRETSV-------ISIRTTGPPIDDGPKTEQ----SDRSETV 141
           EECP+GDRCN+ HEDP+KFR+ S        ISI TTGPP++ G  +      S    ++
Sbjct: 160 EECPYGDRCNFLHEDPKKFRDDSARPRESFAISIGTTGPPMEHGSGSNLGSNLSSNLSSM 219

Query: 140 NSSVDGNWMNLKPASWKTKMCNKWETTGNCPFGDKCHFAHGQSELQ 3
           NS +D    N+KP  WKTK+C KWETTG+CPFG+KCHFAHGQ+ELQ
Sbjct: 220 NSGLDPFRGNVKPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQ 265


>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Cucumis sativus] gi|449520655|ref|XP_004167349.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           39-like [Cucumis sativus]
          Length = 347

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/106 (53%), Positives = 70/106 (66%), Gaps = 11/106 (10%)
 Frame = -3

Query: 287 EECPFGDRCNYRHEDPRKFR-------ETSVISIRTTGPPIDDGPKTEQSDRSETVNSSV 129
           EECP+GDRCN+ HEDP KFR       E+S ISI TTG P+ +G  +        V S  
Sbjct: 162 EECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCS 221

Query: 128 DGNWM----NLKPASWKTKMCNKWETTGNCPFGDKCHFAHGQSELQ 3
             + +    N++P+ WKTK+C KWE TG+CPFGDKCHFAHGQSELQ
Sbjct: 222 VSDALRANGNVRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQ 267


>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
           gi|223536247|gb|EEF37899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 341

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/104 (53%), Positives = 67/104 (64%), Gaps = 9/104 (8%)
 Frame = -3

Query: 287 EECPFGDRCNYRHEDPRKFR-------ETSVISIRTTGPPI--DDGPKTEQSDRSETVNS 135
           E+CP+GDRCN+ HEDP KFR       E+S ISI TT PP+    G  +         N+
Sbjct: 157 EQCPYGDRCNFLHEDPSKFRDDAGRFRESSAISIGTTAPPMMHGSGGLSVVEVNKPVNNA 216

Query: 134 SVDGNWMNLKPASWKTKMCNKWETTGNCPFGDKCHFAHGQSELQ 3
             D    N+KP  WKTK+C KWETTG CPFG+KCHFAHGQ+ELQ
Sbjct: 217 GADAYRGNMKPVYWKTKLCTKWETTGQCPFGEKCHFAHGQAELQ 260


>ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Glycine max]
          Length = 347

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 7/102 (6%)
 Frame = -3

Query: 287 EECPFGDRCNYRHEDPRKFRETSV-------ISIRTTGPPIDDGPKTEQSDRSETVNSSV 129
           EECP+GD+C++ HEDP +FR+ SV       ISI T G P   G  +   + +  VN+ +
Sbjct: 157 EECPYGDKCSFLHEDPARFRDDSVRYRESTSISIGTNGSPKSYGDASNNLESNRAVNTGL 216

Query: 128 DGNWMNLKPASWKTKMCNKWETTGNCPFGDKCHFAHGQSELQ 3
           +    N+K   WKTK+C K+ETTG+CPFGD CHFAHGQ+ELQ
Sbjct: 217 NVFRGNVKSTYWKTKLCIKFETTGHCPFGDDCHFAHGQAELQ 258