BLASTX nr result

ID: Coptis25_contig00041597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041597
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327025.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycin...   153   1e-35
ref|XP_002511026.1| cyclin-dependent protein kinase, putative [R...   153   1e-35
ref|XP_002526473.1| cyclin-dependent protein kinase, putative [R...   153   2e-35
ref|XP_003534482.1| PREDICTED: cyclin-U4-1-like [Glycine max]         151   6e-35

>ref|XP_002327025.1| predicted protein [Populus trichocarpa] gi|222835340|gb|EEE73775.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/87 (85%), Positives = 80/87 (91%)
 Frame = -2

Query: 263 MPKVINFLSSLLEKVAEANDNNRDLQQQKISVFHGLTRPTISVQSYLERIFKYANCSPSC 84
           MPK I FLSSLL++VA++ND NR+ Q QKISVFHGLTRPTIS+QSYLERIFKYANCSPSC
Sbjct: 10  MPKSITFLSSLLQRVADSNDLNREFQPQKISVFHGLTRPTISIQSYLERIFKYANCSPSC 69

Query: 83  FVVAYVYLDRFAQRQPCLPINSFNVHR 3
           FVVAYVYLDRFAQRQP LPINS NVHR
Sbjct: 70  FVVAYVYLDRFAQRQPSLPINSLNVHR 96


>ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycine max]
           gi|255626323|gb|ACU13506.1| unknown [Glycine max]
          Length = 209

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/92 (82%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
 Frame = -2

Query: 275 TPLEMPKVINFLSSLLEKVAEANDNNRDLQQ-QKISVFHGLTRPTISVQSYLERIFKYAN 99
           +P  MPKVI FL SLLE+VAE+ND+N  LQQ QKISVFHGLTRP IS+Q YLERIFKYAN
Sbjct: 8   SPSVMPKVITFLCSLLERVAESNDHNHHLQQHQKISVFHGLTRPNISIQCYLERIFKYAN 67

Query: 98  CSPSCFVVAYVYLDRFAQRQPCLPINSFNVHR 3
           CSPSCFVVAYVYLDRF QRQP LPINSFNVHR
Sbjct: 68  CSPSCFVVAYVYLDRFTQRQPSLPINSFNVHR 99


>ref|XP_002511026.1| cyclin-dependent protein kinase, putative [Ricinus communis]
           gi|223550141|gb|EEF51628.1| cyclin-dependent protein
           kinase, putative [Ricinus communis]
          Length = 203

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/101 (75%), Positives = 85/101 (84%)
 Frame = -2

Query: 305 MGDLETISSGTPLEMPKVINFLSSLLEKVAEANDNNRDLQQQKISVFHGLTRPTISVQSY 126
           M DLE     T + MPKV+ FLSSLL++VAE+ND +  L  Q+ISVFHGLTRP+ISVQSY
Sbjct: 1   MADLEA----TVVVMPKVVTFLSSLLQRVAESNDLSHQLHPQRISVFHGLTRPSISVQSY 56

Query: 125 LERIFKYANCSPSCFVVAYVYLDRFAQRQPCLPINSFNVHR 3
           LERIFKYANCSPSCFV+AYVYLDRFAQRQP  PINSFNVHR
Sbjct: 57  LERIFKYANCSPSCFVIAYVYLDRFAQRQPSFPINSFNVHR 97


>ref|XP_002526473.1| cyclin-dependent protein kinase, putative [Ricinus communis]
           gi|223534148|gb|EEF35864.1| cyclin-dependent protein
           kinase, putative [Ricinus communis]
          Length = 203

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/91 (79%), Positives = 82/91 (90%)
 Frame = -2

Query: 275 TPLEMPKVINFLSSLLEKVAEANDNNRDLQQQKISVFHGLTRPTISVQSYLERIFKYANC 96
           +P  MPK+I FLSSLL++VAE+ND N  +  QKISVFHGLTRPTIS+Q+YLERIFKYANC
Sbjct: 6   SPNLMPKLITFLSSLLQRVAESNDLNLQIHTQKISVFHGLTRPTISIQNYLERIFKYANC 65

Query: 95  SPSCFVVAYVYLDRFAQRQPCLPINSFNVHR 3
           SPSCF+VAYVYLDRFAQRQP LP+NSFNVHR
Sbjct: 66  SPSCFIVAYVYLDRFAQRQPSLPLNSFNVHR 96


>ref|XP_003534482.1| PREDICTED: cyclin-U4-1-like [Glycine max]
          Length = 188

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/92 (79%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
 Frame = -2

Query: 275 TPLEMPKVINFLSSLLEKVAEAND-NNRDLQQQKISVFHGLTRPTISVQSYLERIFKYAN 99
           +P  MPK+I+FLSSLL++VAE+ND N + L  QK+SVFHGLTRPTIS+QSYLERIFKYAN
Sbjct: 6   SPNVMPKLISFLSSLLKRVAESNDLNQQQLIHQKVSVFHGLTRPTISIQSYLERIFKYAN 65

Query: 98  CSPSCFVVAYVYLDRFAQRQPCLPINSFNVHR 3
           CSPSCF+VAYVYLDRF QRQP LPINSFNVHR
Sbjct: 66  CSPSCFIVAYVYLDRFTQRQPSLPINSFNVHR 97


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