BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041592
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_848429.1| cathepsin [Choristoneura fumiferana MNPV] gi|11...    55   4e-06
ref|XP_003093674.1| hypothetical protein CRE_29187 [Caenorhabdit...    54   1e-05
gb|AAB68595.1| cathepsin [Choristoneura fumiferana MNPV]               54   1e-05

>ref|NP_848429.1| cathepsin [Choristoneura fumiferana MNPV]
           gi|1168799|sp|P41715.1|CATV_NPVCF RecName: Full=Viral
           cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
           gi|332509|gb|AAA96732.1| cathepsin [Choristoneura
           fumiferana MNPV] gi|30270084|gb|AAP29900.1| cathepsin
           [Choristoneura fumiferana MNPV]
          Length = 324

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
 Frame = +2

Query: 98  IRSQSEITYQQKLSQIENEKRGL-KYRLKR---HALVLIGYGEEKGVPFYIAQNSYGLCW 265
           +RS   I      S I N KRG+ KY       HA++L+GY  E GVPF+I +N++G  W
Sbjct: 237 LRSVGPIPVAIDASDIVNYKRGIMKYCANHGLNHAVLLVGYAVENGVPFWILKNTWGADW 296

Query: 266 GEEGCLRLDQRGN 304
           GE+G  R+ Q  N
Sbjct: 297 GEQGYFRVQQNIN 309


>ref|XP_003093674.1| hypothetical protein CRE_29187 [Caenorhabditis remanei]
           gi|308249538|gb|EFO93490.1| hypothetical protein
           CRE_29187 [Caenorhabditis remanei]
          Length = 392

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = +2

Query: 185 HALVLIGYGEEKGVPFYIAQNSYGLCWGEEGCLRLDQRGNIGRMREKVVRP 337
           HA+ LIGYG E   P++I +NS+G  WG++G +RL +  N   MR+ VV P
Sbjct: 339 HAMTLIGYGTEGNQPYWIVKNSWGSSWGDQGYMRLARGNNACGMRDFVVAP 389


>gb|AAB68595.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
 Frame = +2

Query: 98  IRSQSEITYQQKLSQIENEKRGL-KYRLKR---HALVLIGYGEEKGVPFYIAQNSYGLCW 265
           +RS   I      S I N KRG+ KY       HA++L+GY  + GVPF+I +N++G  W
Sbjct: 237 LRSVGPIPVAIDASDIVNYKRGIMKYCANHGLNHAVLLVGYAVQNGVPFWILKNTWGADW 296

Query: 266 GEEGCLRLDQRGN 304
           GE+G  R+ Q  N
Sbjct: 297 GEQGYFRVQQNIN 309