BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041587
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    80   1e-13
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    79   5e-13
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    77   2e-12
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              76   3e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              76   3e-12

>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = -3

Query: 244 DKACRDFWWNGTEKSNSVHTIGWKHICKTKAEGGLGLRKARDMNEAMLAKLPWKAATDIQ 65
           DK  R F W  +      H I WK +CK ++EGGLG+RKA+DMN+A+L+K+ W+   D  
Sbjct: 344 DKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYH 403

Query: 64  SLWTRIM 44
           SLW RIM
Sbjct: 404 SLWARIM 410


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 32/67 (47%), Positives = 45/67 (67%)
 Frame = -3

Query: 244 DKACRDFWWNGTEKSNSVHTIGWKHICKTKAEGGLGLRKARDMNEAMLAKLPWKAATDIQ 65
           D+  R F W  T +    H + W+ ICK KAEGG+GLR ARDMN+A++AK+ W+   D +
Sbjct: 682 DRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKE 741

Query: 64  SLWTRIM 44
           SLW R++
Sbjct: 742 SLWARVV 748


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 31/67 (46%), Positives = 43/67 (64%)
 Frame = -3

Query: 244 DKACRDFWWNGTEKSNSVHTIGWKHICKTKAEGGLGLRKARDMNEAMLAKLPWKAATDIQ 65
           DK  R+F W  T +    H + WK +C+ KA GGLGLR ++DMN A+LAK+ W+   D  
Sbjct: 617 DKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKV 676

Query: 64  SLWTRIM 44
           SLW R++
Sbjct: 677 SLWARVL 683


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 29/67 (43%), Positives = 42/67 (62%)
 Frame = -3

Query: 244  DKACRDFWWNGTEKSNSVHTIGWKHICKTKAEGGLGLRKARDMNEAMLAKLPWKAATDIQ 65
            DK CR+F W     +  +H++ W  ICK + EGGLGLR ARD N A L K+ W+  ++I 
Sbjct: 1355 DKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNID 1414

Query: 64   SLWTRIM 44
             LW +++
Sbjct: 1415 KLWVKVL 1421


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 29/67 (43%), Positives = 42/67 (62%)
 Frame = -3

Query: 244  DKACRDFWWNGTEKSNSVHTIGWKHICKTKAEGGLGLRKARDMNEAMLAKLPWKAATDIQ 65
            DK CR+F W     +  +H++ W  ICK + EGGLGLR ARD N A L K+ W+  ++I 
Sbjct: 823  DKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNID 882

Query: 64   SLWTRIM 44
             LW +++
Sbjct: 883  KLWVKVL 889