BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041567
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565149.2| PsbP domain-containing protein 4 [Arabidopsis t...   189   2e-46
gb|AAC00624.1| Unknown protein [Arabidopsis thaliana]                 189   2e-46
ref|XP_002889122.1| thylakoid lumenal 29.8 kDa protein [Arabidop...   188   4e-46
ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4,...   180   1e-43
ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloropl...   179   2e-43

>ref|NP_565149.2| PsbP domain-containing protein 4 [Arabidopsis thaliana]
           gi|190358910|sp|O49292.2|PPD4_ARATH RecName: Full=PsbP
           domain-containing protein 4, chloroplastic; AltName:
           Full=OEC23-like protein 5; Flags: Precursor
           gi|332197812|gb|AEE35933.1| PsbP domain-containing
           protein 4 [Arabidopsis thaliana]
          Length = 260

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/114 (78%), Positives = 105/114 (92%)
 Frame = -2

Query: 357 QEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIGENVDGRVLSTEVMEYD 178
           +EGRLSV+VAPVLRFADNLG+DVKI+NIG P KVI+AFGPEVIGENV+G+VLS+ V E+D
Sbjct: 147 KEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHD 206

Query: 177 GRMYYHYELEPPHYLITATAAGNRLYLFNVTANGLQWKRHSKELKRISETFRVV 16
           GR+YY +ELEPPH LITATAAGNRLYLF+VT NGLQWKRH K+LKRI+ +FR+V
Sbjct: 207 GRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260


>gb|AAC00624.1| Unknown protein [Arabidopsis thaliana]
          Length = 274

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/114 (78%), Positives = 105/114 (92%)
 Frame = -2

Query: 357 QEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIGENVDGRVLSTEVMEYD 178
           +EGRLSV+VAPVLRFADNLG+DVKI+NIG P KVI+AFGPEVIGENV+G+VLS+ V E+D
Sbjct: 161 KEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHD 220

Query: 177 GRMYYHYELEPPHYLITATAAGNRLYLFNVTANGLQWKRHSKELKRISETFRVV 16
           GR+YY +ELEPPH LITATAAGNRLYLF+VT NGLQWKRH K+LKRI+ +FR+V
Sbjct: 221 GRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 274


>ref|XP_002889122.1| thylakoid lumenal 29.8 kDa protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334963|gb|EFH65381.1| thylakoid lumenal
           29.8 kDa protein [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  188 bits (477), Expect = 4e-46
 Identities = 88/114 (77%), Positives = 105/114 (92%)
 Frame = -2

Query: 357 QEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIGENVDGRVLSTEVMEYD 178
           +EGRLSV+VAPVLRFADNLG+DVKI+NIG P KVI+AFGPEVIGENV+G+VLS+ V E++
Sbjct: 143 KEGRLSVIVAPVLRFADNLGDDVKIENIGPPAKVINAFGPEVIGENVEGKVLSSNVAEHE 202

Query: 177 GRMYYHYELEPPHYLITATAAGNRLYLFNVTANGLQWKRHSKELKRISETFRVV 16
           GR+YY +ELEPPH LITATAAGNRLYLF+VT NGLQWKRH K+LKRI+ +FR+V
Sbjct: 203 GRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 256


>ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis
           vinifera] gi|302142754|emb|CBI19957.3| unnamed protein
           product [Vitis vinifera]
          Length = 279

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/114 (73%), Positives = 103/114 (90%)
 Frame = -2

Query: 357 QEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIGENVDGRVLSTEVMEYD 178
           +EGRL V+VAPVLRFADNLG+D K++ IG P+KVI+AFGPEVIGENV+G+VLS  V+E+ 
Sbjct: 166 KEGRLFVIVAPVLRFADNLGDDAKVEKIGPPEKVIAAFGPEVIGENVEGKVLSMGVVEHS 225

Query: 177 GRMYYHYELEPPHYLITATAAGNRLYLFNVTANGLQWKRHSKELKRISETFRVV 16
           GR YY +ELEPPH LITATAAGNRLYLF+VTA+GLQWKRH K+LK+I+++FRVV
Sbjct: 226 GRTYYQFELEPPHVLITATAAGNRLYLFSVTASGLQWKRHYKDLKKIADSFRVV 279


>ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534553|gb|EEF36252.1| Thylakoid
           lumenal 29.8 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 270

 Score =  179 bits (454), Expect = 2e-43
 Identities = 85/114 (74%), Positives = 101/114 (88%)
 Frame = -2

Query: 357 QEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIGENVDGRVLSTEVMEYD 178
           +EGRL V+VAPVLRFAD+LG++  I+ IG P+KVI+AFGPEVIGENV+G+VLS  V E+ 
Sbjct: 157 KEGRLFVIVAPVLRFADDLGDNATIERIGPPEKVINAFGPEVIGENVEGKVLSMNVAEHS 216

Query: 177 GRMYYHYELEPPHYLITATAAGNRLYLFNVTANGLQWKRHSKELKRISETFRVV 16
           GRMYY +ELEPPH LITATAAGNRLYLF+VT NGLQWKRH K+LKRI+E+FRVV
Sbjct: 217 GRMYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIAESFRVV 270