BLASTX nr result
ID: Coptis25_contig00041552
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041552 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2... 79 3e-13 ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 76 3e-12 ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-11 ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncat... 72 4e-11 >ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1| predicted protein [Populus trichocarpa] Length = 400 Score = 79.3 bits (194), Expect = 3e-13 Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 3/101 (2%) Frame = +3 Query: 21 YNITKEATSGIFVQGALHWKTIQSIEENHHLKVVIAYDMEDKKFREVSQPHYD--AGYYH 194 ++I G+F ALHW Q E V+ +D+ D KF E+ QP Y+ +H Sbjct: 205 FHILNRRGYGVFAGHALHWIVPQRRELGIR-DCVLGFDIRDDKFFELPQPDYENKGMNFH 263 Query: 195 TLVSVLDGFLCMFCRYEHHTV-AWVMKDYGMKESWTKLYSV 314 V VL+G LC+ C YEH V WVMK+YG+KESW K++SV Sbjct: 264 VDVGVLEGNLCVMCNYEHVCVDVWVMKEYGVKESWCKMFSV 304 >ref|XP_002308787.1| f-box family protein [Populus trichocarpa] gi|222854763|gb|EEE92310.1| f-box family protein [Populus trichocarpa] Length = 396 Score = 75.9 bits (185), Expect = 3e-12 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Frame = +3 Query: 21 YNITKEATSGIFVQGALHWKTIQSIEENHHLKVVIAYDMEDKKFREVSQPHYDAGYYHTL 200 Y + +G+F GALHW ++ E N +V+A D+ + +REV QP Y ++ Sbjct: 198 YCVHYPGANGVFANGALHWVVGENPESNV-ANIVVALDLGVEDYREVLQPEYKDKNFYID 256 Query: 201 VSVLDGFLCMFCRYEHHTV-AWVMKDYGMKESWTKLYSVEE 320 + VL G LC + V W+MK+YG+KESWTKL+SV + Sbjct: 257 LGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQ 297 >ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1| predicted protein [Populus trichocarpa] Length = 419 Score = 73.6 bits (179), Expect = 2e-11 Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 6/96 (6%) Frame = +3 Query: 48 GIFVQGALHWKTIQSIEENHHLKV---VIAYDMEDKKFREVSQPHYDAG--YYHTLVSVL 212 G+F ALHW I + L + V+ +D+ + KF E+ QP+Y++ + V VL Sbjct: 222 GVFAGHALHW----IIPQRRQLGIRDCVLGFDIRNDKFFELPQPNYESKGMSFQVDVGVL 277 Query: 213 DGFLCMFCRYEHHTV-AWVMKDYGMKESWTKLYSVE 317 +G LC+ C YE+ V WVM++YGMKESW K++SV+ Sbjct: 278 EGNLCVMCNYEYVCVDVWVMREYGMKESWCKMFSVQ 313 >ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1| predicted protein [Populus trichocarpa] Length = 408 Score = 72.8 bits (177), Expect = 3e-11 Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%) Frame = +3 Query: 48 GIFVQGALHWK-TIQSIEENHHLKVVIAYDMEDKKFREVSQPHYDAGYYHTLVSVLDGFL 224 G+F A+HWK T+ + + +++A+D+ ++F+ + QP Y + + V VL G L Sbjct: 215 GVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCL 274 Query: 225 CMFCRYEHHTV-AWVMKDYGMKESWTKLYSV 314 C+FC V WVMK+YG+KESWT L +V Sbjct: 275 CVFCNKNCKQVEIWVMKEYGVKESWTHLCTV 305 >ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355501748|gb|AES82951.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 385 Score = 72.4 bits (176), Expect = 4e-11 Identities = 35/90 (38%), Positives = 54/90 (60%) Frame = +3 Query: 45 SGIFVQGALHWKTIQSIEENHHLKVVIAYDMEDKKFREVSQPHYDAGYYHTLVSVLDGFL 224 SGIFV G ++W I + N L+ +++ D+E++ ++++ PH D + VL L Sbjct: 225 SGIFVSGTVNWLAIDNSSSNSSLRAIVSLDLENESYKKL--PHPDLENELWTLGVLTDCL 282 Query: 225 CMFCRYEHHTVAWVMKDYGMKESWTKLYSV 314 C+F + WVMK+YG KESWTKLY+V Sbjct: 283 CIFTSSDIFFDIWVMKEYGNKESWTKLYNV 312