BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041552
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    76   3e-12
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncat...    72   4e-11

>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
 Frame = +3

Query: 21  YNITKEATSGIFVQGALHWKTIQSIEENHHLKVVIAYDMEDKKFREVSQPHYD--AGYYH 194
           ++I      G+F   ALHW   Q  E       V+ +D+ D KF E+ QP Y+     +H
Sbjct: 205 FHILNRRGYGVFAGHALHWIVPQRRELGIR-DCVLGFDIRDDKFFELPQPDYENKGMNFH 263

Query: 195 TLVSVLDGFLCMFCRYEHHTV-AWVMKDYGMKESWTKLYSV 314
             V VL+G LC+ C YEH  V  WVMK+YG+KESW K++SV
Sbjct: 264 VDVGVLEGNLCVMCNYEHVCVDVWVMKEYGVKESWCKMFSV 304


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +3

Query: 21  YNITKEATSGIFVQGALHWKTIQSIEENHHLKVVIAYDMEDKKFREVSQPHYDAGYYHTL 200
           Y +     +G+F  GALHW   ++ E N    +V+A D+  + +REV QP Y    ++  
Sbjct: 198 YCVHYPGANGVFANGALHWVVGENPESNV-ANIVVALDLGVEDYREVLQPEYKDKNFYID 256

Query: 201 VSVLDGFLCMFCRYEHHTV-AWVMKDYGMKESWTKLYSVEE 320
           + VL G LC    +    V  W+MK+YG+KESWTKL+SV +
Sbjct: 257 LGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQ 297


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
 Frame = +3

Query: 48  GIFVQGALHWKTIQSIEENHHLKV---VIAYDMEDKKFREVSQPHYDAG--YYHTLVSVL 212
           G+F   ALHW     I +   L +   V+ +D+ + KF E+ QP+Y++    +   V VL
Sbjct: 222 GVFAGHALHW----IIPQRRQLGIRDCVLGFDIRNDKFFELPQPNYESKGMSFQVDVGVL 277

Query: 213 DGFLCMFCRYEHHTV-AWVMKDYGMKESWTKLYSVE 317
           +G LC+ C YE+  V  WVM++YGMKESW K++SV+
Sbjct: 278 EGNLCVMCNYEYVCVDVWVMREYGMKESWCKMFSVQ 313


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = +3

Query: 48  GIFVQGALHWK-TIQSIEENHHLKVVIAYDMEDKKFREVSQPHYDAGYYHTLVSVLDGFL 224
           G+F   A+HWK T+    + +   +++A+D+  ++F+ + QP Y +  +   V VL G L
Sbjct: 215 GVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCL 274

Query: 225 CMFCRYEHHTV-AWVMKDYGMKESWTKLYSV 314
           C+FC      V  WVMK+YG+KESWT L +V
Sbjct: 275 CVFCNKNCKQVEIWVMKEYGVKESWTHLCTV 305


>ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355501748|gb|AES82951.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = +3

Query: 45  SGIFVQGALHWKTIQSIEENHHLKVVIAYDMEDKKFREVSQPHYDAGYYHTLVSVLDGFL 224
           SGIFV G ++W  I +   N  L+ +++ D+E++ ++++  PH D       + VL   L
Sbjct: 225 SGIFVSGTVNWLAIDNSSSNSSLRAIVSLDLENESYKKL--PHPDLENELWTLGVLTDCL 282

Query: 225 CMFCRYEHHTVAWVMKDYGMKESWTKLYSV 314
           C+F   +     WVMK+YG KESWTKLY+V
Sbjct: 283 CIFTSSDIFFDIWVMKEYGNKESWTKLYNV 312