BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041550
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14898.3| unnamed protein product [Vitis vinifera]              197   2e-48
emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]   197   2e-48
ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medica...   182   4e-44
ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808...   179   3e-43
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-43

>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  197 bits (501), Expect = 2e-48
 Identities = 110/229 (48%), Positives = 150/229 (65%), Gaps = 8/229 (3%)
 Frame = -2

Query: 663  QLRTSKNQATWLTVALLQLSAVDSTSLDANDLRRCLTNQQSGADDGCCSTYSVGDDVKHS 484
            QLR SKNQ TWLTVALLQLS+V+S+ LDAND R  L  +           +  G++VK  
Sbjct: 482  QLRASKNQTTWLTVALLQLSSVESSFLDANDSRAFLRTE-----------HPRGENVKRL 530

Query: 483  SSCLCCEILSQNVLMQRDTKVKLDIIWRKVLERCHSNKLKRFLQKEGRLSSISVNQGMAL 304
             +C C         +Q D K +L+ +W++  E C S+ LK FL+K+G+LSS+ V+QGMA+
Sbjct: 531  VTCACDNNKPHICEVQEDCKGQLEFLWKQATEICQSSSLKNFLRKQGKLSSVIVSQGMAV 590

Query: 303  AEVEFSHPDHVYRAEKSWKVIASSLQLVLGCDVEIRISVLPCASVRKSLKFKKPSFCIFS 124
            AE+EF HPD+V +AEKSWK+IASSLQ +LGC+VEIRI++ PC SV+   K KKPSF  FS
Sbjct: 591  AELEFQHPDYVSKAEKSWKLIASSLQSILGCNVEIRINLAPCTSVKGYAKVKKPSFSFFS 650

Query: 123  CTRRIPL-----TIEDEIQTDNFDFTSGRAIVATE---TSPSGNGAQLS 1
            C+RR+ L     +     Q+D  DFTS +A++  +   T  S  G+Q+S
Sbjct: 651  CSRRMRLKSHSTSEHGSDQSDCSDFTSEKAMIRDKTIGTCSSDCGSQVS 699


>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score =  197 bits (501), Expect = 2e-48
 Identities = 110/229 (48%), Positives = 150/229 (65%), Gaps = 8/229 (3%)
 Frame = -2

Query: 663  QLRTSKNQATWLTVALLQLSAVDSTSLDANDLRRCLTNQQSGADDGCCSTYSVGDDVKHS 484
            QLR SKNQ TWLTVALLQLS+V+S+ LDAND R  L  +           +  G++VK  
Sbjct: 664  QLRASKNQTTWLTVALLQLSSVESSFLDANDSRAFLRTE-----------HPRGENVKRL 712

Query: 483  SSCLCCEILSQNVLMQRDTKVKLDIIWRKVLERCHSNKLKRFLQKEGRLSSISVNQGMAL 304
             +C C         +Q D K +L+ +W++  E C S+ LK FL+K+G+LSS+ V+QGMA+
Sbjct: 713  VTCACDNNKPHICEVQEDCKGQLEFLWKQATEICQSSSLKNFLRKQGKLSSVIVSQGMAV 772

Query: 303  AEVEFSHPDHVYRAEKSWKVIASSLQLVLGCDVEIRISVLPCASVRKSLKFKKPSFCIFS 124
            AE+EF HPD+V +AEKSWK+IASSLQ +LGC+VEIRI++ PC SV+   K KKPSF  FS
Sbjct: 773  AELEFQHPDYVSKAEKSWKLIASSLQSILGCNVEIRINLAPCTSVKGYAKVKKPSFSFFS 832

Query: 123  CTRRIPL-----TIEDEIQTDNFDFTSGRAIVATE---TSPSGNGAQLS 1
            C+RR+ L     +     Q+D  DFTS +A++  +   T  S  G+Q+S
Sbjct: 833  CSRRMRLKSHSTSEHGSDQSDCSDFTSEKAMIRDKTIGTCSSDCGSQVS 881


>ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
            gi|355509967|gb|AES91109.1| DNA polymerase III subunit
            gamma/tau [Medicago truncatula]
          Length = 936

 Score =  182 bits (463), Expect = 4e-44
 Identities = 98/215 (45%), Positives = 140/215 (65%), Gaps = 4/215 (1%)
 Frame = -2

Query: 663  QLRTSKNQATWLTVALLQLSAVDSTSLDANDLRRCLTNQQSGADDGCCSTYSVGDDVKHS 484
            QLR SKNQ TW T ALLQLS+++ +S+DAND + C+    S  D   CST S  + +KH 
Sbjct: 609  QLRISKNQTTWFTAALLQLSSLEYSSVDANDSKLCI-RAASNRDGDLCSTSSTAESLKHL 667

Query: 483  SSCLCCEILSQNVLMQRDTKVKLDIIWRKVLERCHSNKLKRFLQKEGRLSSISVNQGMAL 304
            ++  C E  S  + +Q D K  LD IW K  E C S +LK FL+K+G+LSS+ +NQG+A 
Sbjct: 668  ATGKCAE-KSYKIEVQDDDKATLDCIWYKATEICESKRLKAFLRKQGKLSSVCINQGLAA 726

Query: 303  AEVEFSHPDHVYRAEKSWKVIASSLQLVLGCDVEIRISVLPCASVRKSLKFKKPSFCIFS 124
             E+EF H  +V RAEKSWK IASSLQ +LGC++E+RI+ +PC +  K  + K+ SF  F+
Sbjct: 727  VELEFHHRVYVARAEKSWKQIASSLQFILGCNIELRINHVPCTTDSKYARLKRSSFNFFN 786

Query: 123  CTRRI---PLTIEDE-IQTDNFDFTSGRAIVATET 31
            C+RRI    L+ +++  ++D  D TS + ++   T
Sbjct: 787  CSRRILRKSLSSDEQGCESDYADCTSQKPMMMDRT 821


>ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808544 [Glycine max]
          Length = 976

 Score =  179 bits (455), Expect = 3e-43
 Identities = 99/218 (45%), Positives = 139/218 (63%), Gaps = 7/218 (3%)
 Frame = -2

Query: 663  QLRTSKNQATWLTVALLQLSAVDSTSLDANDLRRCLTNQQSGADDGCCSTYSVGDDVKHS 484
            QLR SKNQ TW T ALLQLS+V+ +S D ND + C     S  D   CST   GD ++H 
Sbjct: 619  QLRISKNQTTWFTAALLQLSSVEYSSADTNDTKLC-ARSASNRDGDICSTSPKGDSLEHL 677

Query: 483  SSCLCCEILSQNVLM--QRDTKVKLDIIWRKVLERCHSNKLKRFLQKEGRLSSISVNQGM 310
            ++   C+  S  + +  + D +  LD IW K  E C SN+LK FL+K+G+LSS+ ++QG 
Sbjct: 678  ATTGQCDDKSDTLGLGVREDHRRTLDSIWYKATEMCQSNRLKTFLRKQGKLSSVCISQGR 737

Query: 309  ALAEVEFSHPDHVYRAEKSWKVIASSLQLVLGCDVEIRISVLP-CASVRKSLKFKKPSFC 133
            A+AE+EF H D+V RAEKSW++IASSLQ +LGC++E+RI+ +P C S     K K+ SF 
Sbjct: 738  AVAELEFHHRDYVSRAEKSWRLIASSLQFILGCNLELRINCVPSCTSDSIYAKLKRTSFS 797

Query: 132  IFSCTRRIP----LTIEDEIQTDNFDFTSGRAIVATET 31
             F C+RRI      + E   ++D  D+TS R ++ T+T
Sbjct: 798  FFGCSRRIRWKSISSNEQGSESDYADYTSQRPMMKTQT 835


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  179 bits (453), Expect = 6e-43
 Identities = 99/229 (43%), Positives = 144/229 (62%), Gaps = 9/229 (3%)
 Frame = -2

Query: 663  QLRTSKNQATWLTVALLQLSAVDSTSLDANDLRRCLTNQQSGADDGCCSTYSVGDDVKHS 484
            QLR SKNQ+TWLTVALLQLS+++++ +D ND +  + N     D    ST S G+ +KH 
Sbjct: 620  QLRMSKNQSTWLTVALLQLSSLEASPMDVNDSKSSMRNGHD-RDGDFSSTPSTGESLKHL 678

Query: 483  SSCLCCEILSQNVLMQRDTKVKLDIIWRKVLERCHSNKLKRFLQKEGRLSSISVNQGMAL 304
                C +  S+ + +Q D KV LD IW++  E C SN L+ FL+K+G+LSS+  ++G+A+
Sbjct: 679  VLHSCEDRKSERLQVQGDCKVTLDSIWKRASELCKSNSLRNFLRKQGKLSSLHFDKGLAV 738

Query: 303  AEVEFSHPDHVYRAEKSWKVIASSLQLVLGCDVEIRISVLPCASVRKSLKFKKPSFCIFS 124
            AE+EF HP++  +AEKSWK IASSLQ VLGC+VEIRI+++ CA V K  K ++ SF +F 
Sbjct: 739  AELEFHHPNYASKAEKSWKFIASSLQTVLGCNVEIRINLVVCAPVSKCAKLRRLSFSLFG 798

Query: 123  CTR------RIPLTIEDEIQTDNFDFTSGRAIV---ATETSPSGNGAQL 4
            C+R        P+       +D  D  S + ++   A    PS  G+Q+
Sbjct: 799  CSRITRHKSHPPMECGCGSDSDYSDHISEKPMIREKAISACPSDCGSQI 847