BLASTX nr result

ID: Coptis25_contig00041549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041549
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522555.1| conserved hypothetical protein [Ricinus comm...    63   3e-08
ref|XP_004134665.1| PREDICTED: uncharacterized protein LOC101215...    61   1e-07
ref|XP_002317429.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
emb|CAA16736.1| pherophorin - like protein [Arabidopsis thaliana...    59   4e-07
emb|CBI30666.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002522555.1| conserved hypothetical protein [Ricinus communis]
           gi|223538246|gb|EEF39855.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 616

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 60/202 (29%)
 Frame = +2

Query: 47  VVEELRDKETRLQKEVRDLKTDK---------EDELKSKDAKLENFKERIRSLEIEN--- 190
           +VEELRD+E RL+ E+ + K  K         E+E+ +K+A++E   +RI  LE EN   
Sbjct: 76  LVEELRDRECRLKTELLEFKLLKESVAIVPVLENEILAKNAEIEKAMKRIECLERENERL 135

Query: 191 -----IELKRKRFEEERMMM----DDNKLRKT-------DHCFSQSQRFQGKVSSFRKSN 322
                +++ +++ E ER +     + ++L+KT       +   S SQRFQG +    KSN
Sbjct: 136 LSEAEMKINQEKQESERKIKALENEISELKKTVSDREGEELVSSSSQRFQGLMEVSTKSN 195

Query: 323 NIALFV------GSNNP-----------------------EKLVSVDNPIHTRSTS---L 406
            I          G+NN                        E+ V ++ P H+R  S    
Sbjct: 196 LIRNLKKLNTNNGNNNASSSSYHHEPQNNQQKSESLDFKREEDVEIERPRHSRCNSEELA 255

Query: 407 EQVYVRPKVARLPNPPPKPSST 472
           E   +R +V R+P PPPK SS+
Sbjct: 256 ESTLLRSRVPRVPKPPPKRSSS 277


>ref|XP_004134665.1| PREDICTED: uncharacterized protein LOC101215972 [Cucumis sativus]
           gi|449479232|ref|XP_004155543.1| PREDICTED:
           uncharacterized protein LOC101228184 [Cucumis sativus]
          Length = 620

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 60/202 (29%)
 Frame = +2

Query: 47  VVEELRDKETRLQKEVRDLKTDK---------EDELKSKDAKLENFKERIRSLEIEN--- 190
           +VEELRD+E RL+ ++ + K  K         E+E+ +KDA++E   +RI  LE EN   
Sbjct: 74  MVEELRDREARLKTDLLEHKLLKESVAIVPVLENEISTKDAEIERASKRILFLEAENERL 133

Query: 191 ---IELKRKRFEEER-------------------MMMDDNKLR---KTDHCFSQSQRFQG 295
              +E  ++  EEER                   M +D +++    + D   S SQRFQG
Sbjct: 134 RVQVEEAKQSVEEERRESQERIKAMEGEVAELKKMALDRSRMELILENDE-LSASQRFQG 192

Query: 296 KVSSFRKSNNIA----------LFVGSNN-----PE---KLVSVDNPIHTRSTSLEQV-- 415
            +    KSN I             V  +N     PE   + V  + P H+R  S E    
Sbjct: 193 LMEVSGKSNLIRNLKRATKCSDAVVNQDNHKVEHPEAKKEEVETERPRHSRCNSEELAES 252

Query: 416 ---YVRPKVARLPNPPPKPSST 472
               ++ ++ R+P PPPKPSS+
Sbjct: 253 TLSNIKSRIPRVPKPPPKPSSS 274


>ref|XP_002317429.1| predicted protein [Populus trichocarpa] gi|222860494|gb|EEE98041.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 55/195 (28%)
 Frame = +2

Query: 47  VVEELRDKETRLQKEVRDLKTDKED---------ELKSKDAKLENFKERIRSLEIENIEL 199
           +VEELR++E+ L+ E+ + K  KE          E+ +K  ++E   ++I SLE+EN  L
Sbjct: 76  LVEELRERESLLKTELLEYKLLKESVAIIPVLETEITNKILEIEKAVKKIESLELENECL 135

Query: 200 K------RKRFEEER---------MMMDDNKLRK------TDHCFSQSQRFQGKVSSFRK 316
           K      R RFEEER         +  +  +L+K       +  FS SQRFQG +    K
Sbjct: 136 KADLSEVRGRFEEERKEGERKVKELEAEIQELKKAMSDRENEIEFSSSQRFQGLMEVTTK 195

Query: 317 SNNI-ALFVG-------------------SNNPEKLVSVDNPIHTRSTSLE-----QVYV 421
           SN I +L  G                   S   E+ V ++ P H+R  S E        +
Sbjct: 196 SNLIRSLKKGVKFTDIVSSSSQIQNVDHHSKRMEENVEIEKPRHSRCNSEELTESTLANL 255

Query: 422 RPKVARLPNPPPKPS 466
           R +V R+P PPPK S
Sbjct: 256 RSRVPRVPKPPPKRS 270


>emb|CAA16736.1| pherophorin - like protein [Arabidopsis thaliana]
           gi|7268650|emb|CAB78858.1| pherophorin-like protein
           [Arabidopsis thaliana]
          Length = 637

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 42/181 (23%)
 Frame = +2

Query: 50  VEELRDKETRLQKEVRDL--KTDKEDELKSKDAKLENFKERIRSLEIENIELKRKRFE-- 217
           VEELR++E  L+ E  ++  K  + DEL+ + A+L    ER+R  E +  E  R+  E  
Sbjct: 94  VEELREREALLKTENLEIADKNGEIDELRKETARLAEDNERLRR-EFDRSEEMRRECETR 152

Query: 218 EERMMMDDNKLRKT------DHCFSQSQRFQGKVSSFRKSNNIALF--VGS--NNPEKLV 367
           E+ M  +  +LRK       DH  S SQRFQG +    KSN I     VGS  N PE + 
Sbjct: 153 EKEMEAEIVELRKLVSSESDDHALSVSQRFQGLMDVSAKSNLIRSLKRVGSLRNLPEPIT 212

Query: 368 SVDN---------------------PIHTRSTSLEQV-------YVRPKVARLPNPPPKP 463
           + +N                       ++RS++ E++        VR +V R+P PPPK 
Sbjct: 213 NQENTNKSISSSGDADGDIYRKDEIESYSRSSNSEELTESSSLSTVRSRVPRVPKPPPKR 272

Query: 464 S 466
           S
Sbjct: 273 S 273


>emb|CBI30666.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 28/176 (15%)
 Frame = +2

Query: 47  VVEELRDKETRLQKEVRDLKTDKE---------DELKSKDAKLENFKERIRSLEIENIEL 199
           +VEELR++E+RL+ E+ + K  KE         +E+ +K+ ++E   ++I  LE EN   
Sbjct: 63  LVEELRERESRLKTELLEQKLLKESVAILPVLENEITAKEGEIEKCVKKIEGLEGEN--- 119

Query: 200 KRKRFEEERMMMDDNKLRKTDHCFSQSQRFQGKVSSFRKSNNI-ALFVGSNNPE------ 358
             +R +E                 S SQRFQG + +  KSN I +L  G   PE      
Sbjct: 120 -ERRSDE----------------LSSSQRFQGLIDASVKSNLIKSLRKGVKCPEVHDNQK 162

Query: 359 --------KLVSVDNPIHTRSTSLE----QVYVRPKVARLPNPPPKPSSTVLLSSA 490
                        + P H+R  S E       VR +V R+P PPPKPS +   SS+
Sbjct: 163 FEVSDLKKDESEPERPRHSRCNSEEIAETSESVRSRVPRVPKPPPKPSCSSSSSSS 218


Top