BLASTX nr result
ID: Coptis25_contig00041541
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041541 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] 81 3e-18 emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] 82 4e-18 emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] 78 1e-17 emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi... 78 1e-17 emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera] 82 1e-17 >gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] Length = 1180 Score = 81.3 bits (199), Expect(2) = 3e-18 Identities = 39/65 (60%), Positives = 48/65 (73%) Frame = -2 Query: 261 PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82 PD+A+AVS VSQFMH+P HMDAV IL+YLKSAPG GL + D+ Y DAD+AG Sbjct: 973 PDLAYAVSVVSQFMHNPSEAHMDAVFRILQYLKSAPGKGLIFSKYSHLDVSGYTDADWAG 1032 Query: 81 SLSDR 67 S++DR Sbjct: 1033 SITDR 1037 Score = 35.0 bits (79), Expect(2) = 3e-18 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = -1 Query: 67 STSGLCTFYGGCLISWKSKKQQ 2 STSG TF GG L++WKSKKQ+ Sbjct: 1039 STSGYFTFVGGNLVTWKSKKQK 1060 >emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] Length = 1505 Score = 82.4 bits (202), Expect(2) = 4e-18 Identities = 40/65 (61%), Positives = 48/65 (73%) Frame = -2 Query: 261 PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82 PDIAFAVS VSQFMHSP H++AV ILRYLKS PG GLF+ + +Y DAD+AG Sbjct: 1298 PDIAFAVSIVSQFMHSPYEVHLEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTDADWAG 1357 Query: 81 SLSDR 67 S++DR Sbjct: 1358 SVTDR 1362 Score = 33.5 bits (75), Expect(2) = 4e-18 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -1 Query: 67 STSGLCTFYGGCLISWKSKKQ 5 STSG CT+ G L++W+SKKQ Sbjct: 1364 STSGYCTYIWGNLVTWRSKKQ 1384 >emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] Length = 1015 Score = 77.8 bits (190), Expect(2) = 1e-17 Identities = 37/65 (56%), Positives = 46/65 (70%) Frame = -2 Query: 261 PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82 PDI +AVS VS++MH PR+ HMDAV ILRYLK +PG GL++ G + Y DAD+A Sbjct: 790 PDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLGVEGYCDADWAS 849 Query: 81 SLSDR 67 SL DR Sbjct: 850 SLDDR 854 Score = 37.0 bits (84), Expect(2) = 1e-17 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -1 Query: 67 STSGLCTFYGGCLISWKSKKQ 5 STSG C F GG L+SW+SKKQ Sbjct: 856 STSGYCVFVGGNLVSWRSKKQ 876 >emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group] Length = 806 Score = 77.8 bits (190), Expect(2) = 1e-17 Identities = 37/65 (56%), Positives = 46/65 (70%) Frame = -2 Query: 261 PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82 PDI +AVS VS++MH PR+ HMDAV ILRYLK +PG GL++ G + Y DAD+A Sbjct: 599 PDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLGVEGYCDADWAS 658 Query: 81 SLSDR 67 SL DR Sbjct: 659 SLDDR 663 Score = 37.0 bits (84), Expect(2) = 1e-17 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -1 Query: 67 STSGLCTFYGGCLISWKSKKQ 5 STSG C F GG L+SW+SKKQ Sbjct: 665 STSGYCVFVGGNLVSWRSKKQ 685 >emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera] Length = 1625 Score = 81.6 bits (200), Expect(2) = 1e-17 Identities = 39/65 (60%), Positives = 47/65 (72%) Frame = -2 Query: 261 PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82 PDIA+AVS VSQFMH P HMDAV ILRYLKS+PG GL + G + Y DAD+AG Sbjct: 1160 PDIAYAVSVVSQFMHRPSEXHMDAVMRILRYLKSSPGKGLMFSKNGHLKVAGYTDADWAG 1219 Query: 81 SLSDR 67 +++DR Sbjct: 1220 NITDR 1224 Score = 32.7 bits (73), Expect(2) = 1e-17 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = -1 Query: 67 STSGLCTFYGGCLISWKSKKQQ 2 ST+G TF GG L++W+SKKQ+ Sbjct: 1226 STAGYFTFVGGNLVTWRSKKQK 1247