BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041541
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                       81   3e-18
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]    82   4e-18
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]          78   1e-17
emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi...    78   1e-17
emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]    82   1e-17

>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score = 81.3 bits (199), Expect(2) = 3e-18
 Identities = 39/65 (60%), Positives = 48/65 (73%)
 Frame = -2

Query: 261  PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82
            PD+A+AVS VSQFMH+P   HMDAV  IL+YLKSAPG GL +      D+  Y DAD+AG
Sbjct: 973  PDLAYAVSVVSQFMHNPSEAHMDAVFRILQYLKSAPGKGLIFSKYSHLDVSGYTDADWAG 1032

Query: 81   SLSDR 67
            S++DR
Sbjct: 1033 SITDR 1037



 Score = 35.0 bits (79), Expect(2) = 3e-18
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -1

Query: 67   STSGLCTFYGGCLISWKSKKQQ 2
            STSG  TF GG L++WKSKKQ+
Sbjct: 1039 STSGYFTFVGGNLVTWKSKKQK 1060


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score = 82.4 bits (202), Expect(2) = 4e-18
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = -2

Query: 261  PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82
            PDIAFAVS VSQFMHSP   H++AV  ILRYLKS PG GLF+       + +Y DAD+AG
Sbjct: 1298 PDIAFAVSIVSQFMHSPYEVHLEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTDADWAG 1357

Query: 81   SLSDR 67
            S++DR
Sbjct: 1358 SVTDR 1362



 Score = 33.5 bits (75), Expect(2) = 4e-18
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 67   STSGLCTFYGGCLISWKSKKQ 5
            STSG CT+  G L++W+SKKQ
Sbjct: 1364 STSGYCTYIWGNLVTWRSKKQ 1384


>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
          Length = 1015

 Score = 77.8 bits (190), Expect(2) = 1e-17
 Identities = 37/65 (56%), Positives = 46/65 (70%)
 Frame = -2

Query: 261 PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82
           PDI +AVS VS++MH PR+ HMDAV  ILRYLK +PG GL++   G   +  Y DAD+A 
Sbjct: 790 PDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLGVEGYCDADWAS 849

Query: 81  SLSDR 67
           SL DR
Sbjct: 850 SLDDR 854



 Score = 37.0 bits (84), Expect(2) = 1e-17
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = -1

Query: 67  STSGLCTFYGGCLISWKSKKQ 5
           STSG C F GG L+SW+SKKQ
Sbjct: 856 STSGYCVFVGGNLVSWRSKKQ 876


>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
          Length = 806

 Score = 77.8 bits (190), Expect(2) = 1e-17
 Identities = 37/65 (56%), Positives = 46/65 (70%)
 Frame = -2

Query: 261 PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82
           PDI +AVS VS++MH PR+ HMDAV  ILRYLK +PG GL++   G   +  Y DAD+A 
Sbjct: 599 PDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLGVEGYCDADWAS 658

Query: 81  SLSDR 67
           SL DR
Sbjct: 659 SLDDR 663



 Score = 37.0 bits (84), Expect(2) = 1e-17
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = -1

Query: 67  STSGLCTFYGGCLISWKSKKQ 5
           STSG C F GG L+SW+SKKQ
Sbjct: 665 STSGYCVFVGGNLVSWRSKKQ 685


>emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]
          Length = 1625

 Score = 81.6 bits (200), Expect(2) = 1e-17
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = -2

Query: 261  PDIAFAVSTVSQFMHSPRTTHMDAVDHILRYLKSAPGLGLFYPVGGSPDLVSYFDADYAG 82
            PDIA+AVS VSQFMH P   HMDAV  ILRYLKS+PG GL +   G   +  Y DAD+AG
Sbjct: 1160 PDIAYAVSVVSQFMHRPSEXHMDAVMRILRYLKSSPGKGLMFSKNGHLKVAGYTDADWAG 1219

Query: 81   SLSDR 67
            +++DR
Sbjct: 1220 NITDR 1224



 Score = 32.7 bits (73), Expect(2) = 1e-17
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -1

Query: 67   STSGLCTFYGGCLISWKSKKQQ 2
            ST+G  TF GG L++W+SKKQ+
Sbjct: 1226 STAGYFTFVGGNLVTWRSKKQK 1247