BLASTX nr result

ID: Coptis25_contig00041508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041508
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera]    90   2e-16
ref|XP_002320765.1| AP2/ERF domain-containing transcription fact...    87   1e-15
ref|XP_002301322.1| AP2/ERF domain-containing transcription fact...    86   4e-15
ref|XP_002511793.1| hypothetical protein RCOM_1613750 [Ricinus c...    85   7e-15
ref|XP_003529962.1| PREDICTED: ethylene-responsive transcription...    72   5e-11

>emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera]
          Length = 345

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 2/70 (2%)
 Frame = -1

Query: 204 LRGENARTNFAPLSPCSTQSESSPLH--FPESHDGRHGLNFSSLKAKLSKNLQSIIARTK 31
           LRGENARTNFAP++P S QS SSP    F    + R+GL+FSSLKAKLSKNLQSI+ART 
Sbjct: 148 LRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLKAKLSKNLQSIMARTS 207

Query: 30  DNKSAKTRVS 1
           DNKS+K+RVS
Sbjct: 208 DNKSSKSRVS 217


>ref|XP_002320765.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222861538|gb|EEE99080.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 306

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 51/73 (69%), Positives = 56/73 (76%), Gaps = 5/73 (6%)
 Frame = -1

Query: 204 LRGENARTNFAPLSPCSTQSESSP-----LHFPESHDGRHGLNFSSLKAKLSKNLQSIIA 40
           LRGENARTNFA +SP   QS SSP     L+  ES D RHGL+FSSLKAKLSKNLQSI+A
Sbjct: 75  LRGENARTNFASVSPNLNQSGSSPSSNGGLNMSES-DERHGLSFSSLKAKLSKNLQSIMA 133

Query: 39  RTKDNKSAKTRVS 1
           RT +NKS K RVS
Sbjct: 134 RTTENKSTKNRVS 146


>ref|XP_002301322.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222843048|gb|EEE80595.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 230

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 48/72 (66%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
 Frame = -1

Query: 204 LRGENARTNFAPLSPCSTQSESSP----LHFPESHDGRHGLNFSSLKAKLSKNLQSIIAR 37
           LRG NARTNFA ++P   QS SSP     + PES DGRH L+FSSLKA+LSKNLQSI+AR
Sbjct: 75  LRGGNARTNFASVNPSLNQSGSSPSNGGFNMPES-DGRHSLSFSSLKARLSKNLQSIMAR 133

Query: 36  TKDNKSAKTRVS 1
           T +NKS K RVS
Sbjct: 134 TTENKSTKNRVS 145


>ref|XP_002511793.1| hypothetical protein RCOM_1613750 [Ricinus communis]
           gi|223548973|gb|EEF50462.1| hypothetical protein
           RCOM_1613750 [Ricinus communis]
          Length = 291

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
 Frame = -1

Query: 204 LRGENARTNFAPLSPCSTQSESSPLH--FPESHDGRHGLNFSSLKAKLSKNLQSIIARTK 31
           LRGENARTNFA ++P S  S SSP +  F    DGRH L+FSSLKAKLSKNLQSI+ART 
Sbjct: 78  LRGENARTNFASVNPNSYHSGSSPSNGGFVSESDGRHSLSFSSLKAKLSKNLQSIMARTT 137

Query: 30  DNKSAKTRVS 1
           +++S K RVS
Sbjct: 138 ESRSTKNRVS 147


>ref|XP_003529962.1| PREDICTED: ethylene-responsive transcription factor 4-like [Glycine
           max]
          Length = 333

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 7/75 (9%)
 Frame = -1

Query: 204 LRGENARTNFAPLSPC---STQSESSPLHFPESHDGRHGLNFSSLKAKLSKNLQSIIART 34
           LRGENARTNFAP+S       QS S+      S  G+HGL+F+SLKAKLSKNLQ+I+AR 
Sbjct: 82  LRGENARTNFAPVSQVILGQQQSGSNNNLSTGSDIGKHGLSFASLKAKLSKNLQNIMARA 141

Query: 33  KD----NKSAKTRVS 1
            D    NKS+K+RVS
Sbjct: 142 SDHNNNNKSSKSRVS 156


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