BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041503
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   122   4e-26
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....   102   3e-20
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...   102   3e-20
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...   102   4e-20
gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana]     96   3e-18

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 8/110 (7%)
 Frame = +2

Query: 128 YSFYIRRFSTPDPLVISRLR--------TQLVGPTSSHGLDMSTVQSLPIFGYDGNAKEA 283
           +S YIRRF+  + + +SR R        +    PT S GLD STV SLP+F Y G+AKE 
Sbjct: 73  FSVYIRRFAEDNAVEMSRRRRHPNPPASSSSRSPTPSKGLDASTVSSLPLFSYHGDAKET 132

Query: 284 VYCSVCLSEFEEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELF 433
           + C VCL++FE+K+TVK+IP C HV+H  CID W  SHVSCP+CRS +LF
Sbjct: 133 LDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLSSHVSCPVCRSTQLF 182


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  102 bits (255), Expect = 3e-20
 Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 17/156 (10%)
 Frame = +2

Query: 17  PPSQPPNAKQPLISLTSFDCXXXXXXXXXXXXXXXSLYSFYIRRF---STPDPLVISRLR 187
           PP +PP+A    ++LT F                   +S YI  F   ST +   I R R
Sbjct: 37  PPPEPPSALDSSMALTIF--------VLLVALFFMGFFSVYIHHFVDDSTVEISSIPRTR 88

Query: 188 TQLVGP-------------TSSHGLDMSTVQSLPIFGYDGNAKEAVY-CSVCLSEFEEKE 325
           +  + P             +   GLD  TV+SLP++ Y    K+    C +CLSEFEE E
Sbjct: 89  SSRMSPRRLSTSVVVSRPYSYRRGLDSQTVRSLPVYHYTKATKQRNEDCVICLSEFEEGE 148

Query: 326 TVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELF 433
           TVK+IP+CGHV+H +C+D W  S+V+CPLCRS +LF
Sbjct: 149 TVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLF 184


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
           gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName:
           Full=RING-H2 finger protein ATL57
           gi|4510422|gb|AAD21508.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|26452105|dbj|BAC43142.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
           At2g27940 [Arabidopsis thaliana]
           gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
           [Arabidopsis thaliana]
          Length = 237

 Score =  102 bits (255), Expect = 3e-20
 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 19/158 (12%)
 Frame = +2

Query: 17  PPSQPPNAKQPLISLTSFDCXXXXXXXXXXXXXXXSLYSFYIRRF-----STPDPLVISR 181
           PP QPP+A    ++LT F                   +S Y R F     ST D   + R
Sbjct: 38  PPPQPPSALDSTMALTIF--------ILLVALFFMGFFSVYFRHFADSSSSTVDISSMPR 89

Query: 182 LRTQLVGP-------------TSSHGLDMSTVQSLPIFGYDGNAKEAVY-CSVCLSEFEE 319
            R+  + P             +   GLD   V+SLP++ Y   AK+    C +CLS+FEE
Sbjct: 90  TRSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEE 149

Query: 320 KETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELF 433
            ETVK+IP+CGHV+H +C+D W  S+V+CPLCRS +LF
Sbjct: 150 GETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLF 187


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
 Frame = +2

Query: 128 YSFYIRRFST----------PDPLVISRLRTQLVGPTSSHGLDMSTVQSLPIFGY-DGNA 274
           +S YIRRFST          P P   S  R   V   S  GLD   ++SLP++ Y  G A
Sbjct: 67  FSIYIRRFSTEPASEFTSHHPGPGTPSNQRPSRVVGGSRKGLDPEVIKSLPVYSYYHGEA 126

Query: 275 KEAVYCSVCLSEFEEKETVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSIELFK 436
           K  + C+VCL EFEEKETVK IP C H++H ECI+ W   HV+CP+CR  +  +
Sbjct: 127 KYQIECAVCLGEFEEKETVKSIPYCKHMFHLECIETWLKLHVTCPVCRGTQFLE 180


>gb|AAC77829.1| putative zinc finger protein [Arabidopsis thaliana]
          Length = 304

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = +2

Query: 149 FSTPDPLVISRLRTQLVGPTSSHGLDMSTVQSLPIFGY-DGNAKEAVYCSVCLSEFEEKE 325
           F T DP       T      +S GLD + ++SLP+F + D   K+ + C+VCLSEFEE E
Sbjct: 77  FFTADPF------TAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESE 130

Query: 326 TVKLIPNCGHVYHSECIDKWFVSHVSCPLCRSI 424
           T +++PNC H +H +CID WF SH +CPLCRS+
Sbjct: 131 TGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSL 163