BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041493
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   135   4e-30
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   132   3e-29
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   129   2e-28

>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  135 bits (339), Expect = 4e-30
 Identities = 71/112 (63%), Positives = 80/112 (71%)
 Frame = +1

Query: 1    LDDATGQSVLQDALQILSCKEIRIQSNRGAAXXXXXXXXXXXXXXXXXXXRRKLVAQVAK 180
            ++DATGQSVLQDA QIL CKEIRI S R ++                   RRK + Q  K
Sbjct: 1082 IEDATGQSVLQDAFQILGCKEIRISSTRASSESADVEEEGGENGSAA---RRKAITQAVK 1138

Query: 181  KSLIQNAIPIFIELKRLLESKNSPLTGCLMECLRVLLKDYKNEIDDILVADK 336
            K LIQN +PIFIELKRLLE+KNSPL G LMECLR++LKDYKNEIDDILVADK
Sbjct: 1139 KGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADK 1190


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  132 bits (332), Expect = 3e-29
 Identities = 70/112 (62%), Positives = 79/112 (70%)
 Frame = +1

Query: 1    LDDATGQSVLQDALQILSCKEIRIQSNRGAAXXXXXXXXXXXXXXXXXXXRRKLVAQVAK 180
            ++DATGQSVLQDA QIL CKEIRI S R ++                   R K + Q  K
Sbjct: 1092 IEDATGQSVLQDAFQILGCKEIRISSTRASSESADVEEEGGESGSAA---RGKTITQAVK 1148

Query: 181  KSLIQNAIPIFIELKRLLESKNSPLTGCLMECLRVLLKDYKNEIDDILVADK 336
            K LIQN +PIFIELKRLLE+KNSPL G LMECLR++LKDYKNEIDDILVADK
Sbjct: 1149 KGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADK 1200


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  132 bits (331), Expect = 4e-29
 Identities = 71/113 (62%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
 Frame = +1

Query: 1    LDDATGQSVLQDALQILSCKEIRIQSNRGA-AXXXXXXXXXXXXXXXXXXXRRKLVAQVA 177
            L+D  GQSVLQDA QIL+CKEIRI S RG+                     +R  + Q  
Sbjct: 1027 LEDVRGQSVLQDAFQILACKEIRIPSGRGSQTDAGDVEEESGDGGVSAAAAKRGAITQAV 1086

Query: 178  KKSLIQNAIPIFIELKRLLESKNSPLTGCLMECLRVLLKDYKNEIDDILVADK 336
            KK LIQN IPIFIELKRLLESKNSPLTG LMECLR++LKDYKNEID+ILVADK
Sbjct: 1087 KKGLIQNTIPIFIELKRLLESKNSPLTGSLMECLRIILKDYKNEIDEILVADK 1139


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/115 (60%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
 Frame = +1

Query: 1    LDDATGQSVLQDALQILSCKEIRIQSNRGA---AXXXXXXXXXXXXXXXXXXXRRKLVAQ 171
            ++D  GQSVLQD  +IL+CKEIRI S RG+   +                   R + + Q
Sbjct: 1067 MEDVHGQSVLQDTFRILACKEIRIPSTRGSTSDSADGEEEGLDGGAASEASAARGRAITQ 1126

Query: 172  VAKKSLIQNAIPIFIELKRLLESKNSPLTGCLMECLRVLLKDYKNEIDDILVADK 336
              KKSL+QN IPIFIELKRLLESKNSPLTG LMECLR+LLKDYKNEIDD+LVADK
Sbjct: 1127 AVKKSLVQNTIPIFIELKRLLESKNSPLTGSLMECLRILLKDYKNEIDDMLVADK 1181


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/115 (60%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
 Frame = +1

Query: 1    LDDATGQSVLQDALQILSCKEIRIQSNRGA---AXXXXXXXXXXXXXXXXXXXRRKLVAQ 171
            ++D  GQSVLQD  +IL+CKEIRI S RG+   +                   R + + Q
Sbjct: 1108 MEDVHGQSVLQDTFRILACKEIRIPSTRGSTSDSADGEEEGLDGGAASEASAARGRAITQ 1167

Query: 172  VAKKSLIQNAIPIFIELKRLLESKNSPLTGCLMECLRVLLKDYKNEIDDILVADK 336
              KKSL+QN IPIFIELKRLLESKNSPLTG LMECLR+LLKDYKNEIDD+LVADK
Sbjct: 1168 AVKKSLVQNTIPIFIELKRLLESKNSPLTGSLMECLRILLKDYKNEIDDMLVADK 1222