BLASTX nr result

ID: Coptis25_contig00041483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041483
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531408.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002266853.1| PREDICTED: uncharacterized protein LOC100251...    55   8e-06

>ref|XP_002531408.1| conserved hypothetical protein [Ricinus communis]
           gi|223529001|gb|EEF30992.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 162

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = -2

Query: 178 KAISSNTLLLNDTSTQCKYVYPDPVPEFAQTETLKFRSELRKNLWTNKE-FGDDLDKVV 5
           K ISSNT+    T +   YVY DP+PEFAQ+ET KFR+E+ K L  +K+ FG DLDKVV
Sbjct: 37  KPISSNTV--GATPSFQNYVYSDPIPEFAQSETEKFRAEILKKLSKDKQTFGGDLDKVV 93


>ref|XP_002266853.1| PREDICTED: uncharacterized protein LOC100251854 [Vitis vinifera]
           gi|296086501|emb|CBI32090.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = -2

Query: 139 STQCKYVYPDPVPEFAQTETLKFRSELRKNLWTNKE-FGDDLDKVVS 2
           ST  KYVYPDP+PEFA+ ET KFR EL K L   K+ F DDL  VV+
Sbjct: 72  STPQKYVYPDPIPEFAEAETEKFRVELLKKLSKEKDTFRDDLHAVVA 118


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