BLASTX nr result

ID: Coptis25_contig00041469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041469
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330583.1| amino acid permease [Populus trichocarpa] gi...   105   4e-21
ref|XP_002330585.1| amino acid permease [Populus trichocarpa] gi...   104   9e-21
ref|XP_002533728.1| amino acid transporter, putative [Ricinus co...   103   1e-20
ref|XP_002336318.1| amino acid permease [Populus trichocarpa] gi...   103   1e-20
ref|XP_002330581.1| amino acid permease [Populus trichocarpa] gi...   103   2e-20

>ref|XP_002330583.1| amino acid permease [Populus trichocarpa]
           gi|222872141|gb|EEF09272.1| amino acid permease [Populus
           trichocarpa]
          Length = 471

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/84 (63%), Positives = 63/84 (75%)
 Frame = -1

Query: 253 GPLSMLFFAAVTLVSAFLLSDCYISPHSEHGQIRNRTYMEAVKLNLGRKSIWICGMVQQI 74
           GPL+MLFFAAVTL+S FLL D Y SP  E G  RNR+Y EAV + LG K+  ICG +QQ+
Sbjct: 72  GPLAMLFFAAVTLLSTFLLCDSYRSPDPEFGPSRNRSYREAVHIILGEKNALICGFLQQV 131

Query: 73  GLFGIGIAYVITASTSMSAIQRSN 2
           GL GIGIAY +TA+ SM  IQ+SN
Sbjct: 132 GLCGIGIAYTVTAAISMREIQKSN 155


>ref|XP_002330585.1| amino acid permease [Populus trichocarpa]
           gi|222872143|gb|EEF09274.1| amino acid permease [Populus
           trichocarpa]
          Length = 458

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/84 (61%), Positives = 63/84 (75%)
 Frame = -1

Query: 253 GPLSMLFFAAVTLVSAFLLSDCYISPHSEHGQIRNRTYMEAVKLNLGRKSIWICGMVQQI 74
           GP+S+L FA VT VSAFLLSDCY SP    G  RN +YM AV++NLG+   W CG++Q +
Sbjct: 57  GPVSLLCFAIVTYVSAFLLSDCYRSPDPITGT-RNYSYMHAVRVNLGKTQTWFCGLLQYV 115

Query: 73  GLFGIGIAYVITASTSMSAIQRSN 2
            ++G GIAYVIT STSM AIQRSN
Sbjct: 116 SMYGTGIAYVITTSTSMRAIQRSN 139


>ref|XP_002533728.1| amino acid transporter, putative [Ricinus communis]
           gi|223526366|gb|EEF28659.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 456

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/84 (60%), Positives = 63/84 (75%)
 Frame = -1

Query: 253 GPLSMLFFAAVTLVSAFLLSDCYISPHSEHGQIRNRTYMEAVKLNLGRKSIWICGMVQQI 74
           GP+S+L FA VT VSAFLLSDCY SP    G  RN +YM+AV++NLG+   W CG++Q  
Sbjct: 55  GPISLLCFAIVTYVSAFLLSDCYRSPDPVTGT-RNYSYMDAVRVNLGKTQTWFCGLLQYF 113

Query: 73  GLFGIGIAYVITASTSMSAIQRSN 2
            +FG GIAYVIT +TSM AIQ+SN
Sbjct: 114 SMFGTGIAYVITTATSMKAIQKSN 137


>ref|XP_002336318.1| amino acid permease [Populus trichocarpa]
           gi|222834652|gb|EEE73115.1| amino acid permease [Populus
           trichocarpa]
          Length = 431

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = -1

Query: 253 GPLSMLFFAAVTLVSAFLLSDCYISPHSEHGQIRNRTYMEAVKLNLGRKSIWICGMVQQI 74
           GP++ML FA+VTL+SAFLL DCY SP  E G  RNR+Y+EAV   LG+++  +CG+  QI
Sbjct: 34  GPVTMLCFASVTLLSAFLLCDCYRSPDPEFGPKRNRSYLEAVHETLGKRNALVCGVFAQI 93

Query: 73  GLFGIGIAYVITASTSMSAIQRSN 2
           G +G GIAY IT +TSM AIQ+SN
Sbjct: 94  GFYGTGIAYTITTATSMRAIQKSN 117


>ref|XP_002330581.1| amino acid permease [Populus trichocarpa]
           gi|222872139|gb|EEF09270.1| amino acid permease [Populus
           trichocarpa]
          Length = 134

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/84 (60%), Positives = 63/84 (75%)
 Frame = -1

Query: 253 GPLSMLFFAAVTLVSAFLLSDCYISPHSEHGQIRNRTYMEAVKLNLGRKSIWICGMVQQI 74
           GP++ML FA VTLVSAFLL DCY SP  E G  RNR+Y+EAV   LG+++  ICG++ QI
Sbjct: 34  GPVTMLCFALVTLVSAFLLCDCYRSPDPEFGPKRNRSYLEAVHETLGKRNALICGVLAQI 93

Query: 73  GLFGIGIAYVITASTSMSAIQRSN 2
           GL+G GI Y IT + SM AIQ+SN
Sbjct: 94  GLYGTGIVYTITTAISMRAIQKSN 117


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