BLASTX nr result

ID: Coptis25_contig00041465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041465
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinu...   108   6e-22
ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228...   100   2e-19
ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220...   100   2e-19
ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812...    81   1e-13

>ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223526683|gb|EEF28920.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1097

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/96 (58%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
 Frame = +2

Query: 8   DARSSKVLLSPSVEPVKYLEVKSVKDG-KSDSFSVIRASLVPSLLQLKDIAFPSRFSALQ 184
           +A +S+ L SPS EP+KYLE+KSV+ G +S++ S++RAS VP+LLQLKDIAFPS  SA+Q
Sbjct: 705 EANTSRTLFSPSTEPIKYLEIKSVRPGMRSEAPSIVRASQVPNLLQLKDIAFPSSLSAIQ 764

Query: 185 DASTPVSTSI-------PQPTLNTRPASPYSRKPSP 271
           +A  PVS+ +       PQP  N+RPASPYSR+PSP
Sbjct: 765 NAWKPVSSPVSLSPLNSPQPMGNSRPASPYSRRPSP 800


>ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
 Frame = +2

Query: 8   DARSSKVLLSPSVEPVKYLEVKSVKDG-KSDSFSVIRASLVPSLLQLKDIAFPSRFSALQ 184
           D R S++LLSP+ EPVKY E+KSV+ G +  S S++RAS VPSL QLKDIAFPS  SA+Q
Sbjct: 569 DVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRASQVPSLQQLKDIAFPSSLSAIQ 628

Query: 185 DASTP--VSTSIPQPTLNTRPASPYSRKPSP 271
           +A  P  V+   P P  N+RPASPY+R+PSP
Sbjct: 629 NALRPALVAPPSPPPMGNSRPASPYARRPSP 659


>ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
 Frame = +2

Query: 8   DARSSKVLLSPSVEPVKYLEVKSVKDG-KSDSFSVIRASLVPSLLQLKDIAFPSRFSALQ 184
           D R S++LLSP+ EPVKY E+KSV+ G +  S S++RAS VPSL QLKDIAFPS  SA+Q
Sbjct: 707 DVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRASQVPSLQQLKDIAFPSSLSAIQ 766

Query: 185 DASTP--VSTSIPQPTLNTRPASPYSRKPSP 271
           +A  P  V+   P P  N+RPASPY+R+PSP
Sbjct: 767 NALRPALVAPPSPPPMGNSRPASPYARRPSP 797


>ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|222851492|gb|EEE89039.1|
           predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 8/96 (8%)
 Frame = +2

Query: 8   DARSSKVLLSPSVEPVKYLEVKSVKDG-KSDSFSVIRASLVPSLLQLKDIAFPSRFSALQ 184
           + R S++LLSP+ EP+KYLE+KS K G +S++ S++RAS VPSLL LKD+AFPS  S LQ
Sbjct: 706 EPRFSRILLSPTTEPIKYLEIKSGKQGAQSEAASIVRASQVPSLLPLKDVAFPSSPSTLQ 765

Query: 185 DASTPVSTSIP-------QPTLNTRPASPYSRKPSP 271
           +A  P    +P       QP  N+RP+SPYSR+PSP
Sbjct: 766 NAWKPAPPIVPQLTVNSSQPAANSRPSSPYSRRPSP 801


>ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   DARSSKVLLSPSVEPVKYLEVKSVKDGKSDSFS-VIRASLVPSLLQLKDIAFPSRFSALQ 184
           + RSS+VLL P+ EPVKYLE+++ K G    FS ++RA+ VP+ LQLKD+AFP   S+ Q
Sbjct: 700 EVRSSRVLLPPTTEPVKYLEIRTNKPGNMHDFSSIVRAAQVPTSLQLKDVAFPISLSSAQ 759

Query: 185 DASTPVSTSIPQPTLNTRPASPYSRKP 265
           +   PV    P       P SPY+R+P
Sbjct: 760 NVYKPVIQPTPPTPATPIPMSPYARRP 786


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