BLASTX nr result
ID: Coptis25_contig00041465
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041465 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinu... 108 6e-22 ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228... 100 2e-19 ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220... 100 2e-19 ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|2... 100 2e-19 ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812... 81 1e-13 >ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis] Length = 1097 Score = 108 bits (269), Expect = 6e-22 Identities = 56/96 (58%), Positives = 74/96 (77%), Gaps = 8/96 (8%) Frame = +2 Query: 8 DARSSKVLLSPSVEPVKYLEVKSVKDG-KSDSFSVIRASLVPSLLQLKDIAFPSRFSALQ 184 +A +S+ L SPS EP+KYLE+KSV+ G +S++ S++RAS VP+LLQLKDIAFPS SA+Q Sbjct: 705 EANTSRTLFSPSTEPIKYLEIKSVRPGMRSEAPSIVRASQVPNLLQLKDIAFPSSLSAIQ 764 Query: 185 DASTPVSTSI-------PQPTLNTRPASPYSRKPSP 271 +A PVS+ + PQP N+RPASPYSR+PSP Sbjct: 765 NAWKPVSSPVSLSPLNSPQPMGNSRPASPYSRRPSP 800 >ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis sativus] Length = 958 Score = 99.8 bits (247), Expect = 2e-19 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 3/91 (3%) Frame = +2 Query: 8 DARSSKVLLSPSVEPVKYLEVKSVKDG-KSDSFSVIRASLVPSLLQLKDIAFPSRFSALQ 184 D R S++LLSP+ EPVKY E+KSV+ G + S S++RAS VPSL QLKDIAFPS SA+Q Sbjct: 569 DVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRASQVPSLQQLKDIAFPSSLSAIQ 628 Query: 185 DASTP--VSTSIPQPTLNTRPASPYSRKPSP 271 +A P V+ P P N+RPASPY+R+PSP Sbjct: 629 NALRPALVAPPSPPPMGNSRPASPYARRPSP 659 >ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus] Length = 1075 Score = 99.8 bits (247), Expect = 2e-19 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 3/91 (3%) Frame = +2 Query: 8 DARSSKVLLSPSVEPVKYLEVKSVKDG-KSDSFSVIRASLVPSLLQLKDIAFPSRFSALQ 184 D R S++LLSP+ EPVKY E+KSV+ G + S S++RAS VPSL QLKDIAFPS SA+Q Sbjct: 707 DVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRASQVPSLQQLKDIAFPSSLSAIQ 766 Query: 185 DASTP--VSTSIPQPTLNTRPASPYSRKPSP 271 +A P V+ P P N+RPASPY+R+PSP Sbjct: 767 NALRPALVAPPSPPPMGNSRPASPYARRPSP 797 >ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa] Length = 1109 Score = 99.8 bits (247), Expect = 2e-19 Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 8/96 (8%) Frame = +2 Query: 8 DARSSKVLLSPSVEPVKYLEVKSVKDG-KSDSFSVIRASLVPSLLQLKDIAFPSRFSALQ 184 + R S++LLSP+ EP+KYLE+KS K G +S++ S++RAS VPSLL LKD+AFPS S LQ Sbjct: 706 EPRFSRILLSPTTEPIKYLEIKSGKQGAQSEAASIVRASQVPSLLPLKDVAFPSSPSTLQ 765 Query: 185 DASTPVSTSIP-------QPTLNTRPASPYSRKPSP 271 +A P +P QP N+RP+SPYSR+PSP Sbjct: 766 NAWKPAPPIVPQLTVNSSQPAANSRPSSPYSRRPSP 801 >ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max] Length = 1078 Score = 80.9 bits (198), Expect = 1e-13 Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 1/87 (1%) Frame = +2 Query: 8 DARSSKVLLSPSVEPVKYLEVKSVKDGKSDSFS-VIRASLVPSLLQLKDIAFPSRFSALQ 184 + RSS+VLL P+ EPVKYLE+++ K G FS ++RA+ VP+ LQLKD+AFP S+ Q Sbjct: 700 EVRSSRVLLPPTTEPVKYLEIRTNKPGNMHDFSSIVRAAQVPTSLQLKDVAFPISLSSAQ 759 Query: 185 DASTPVSTSIPQPTLNTRPASPYSRKP 265 + PV P P SPY+R+P Sbjct: 760 NVYKPVIQPTPPTPATPIPMSPYARRP 786