BLASTX nr result

ID: Coptis25_contig00041464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041464
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254...    89   5e-16
emb|CBI23652.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811...    77   1e-12
emb|CBI35500.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246...    77   1e-12

>ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = -3

Query: 234  RKPSPPRSPVHAFSKSAVDTLKKTNELLNLEIFNLQNELKSLRQKSEIQDVELHKSEVRA 55
            R+PSPPRS    FS+S +D+LKKTNELLN E+  LQN+++SL+QKSE QD E+ K    A
Sbjct: 795  RRPSPPRSAGPVFSRSVIDSLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNA 854

Query: 54   QEAASLAEQNSSKLTEAK 1
            QEA  LA + SSK T AK
Sbjct: 855  QEADLLALEESSKCTVAK 872


>emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = -3

Query: 234  RKPSPPRSPVHAFSKSAVDTLKKTNELLNLEIFNLQNELKSLRQKSEIQDVELHKSEVRA 55
            R+PSPPRS    FS+S +D+LKKTNELLN E+  LQN+++SL+QKSE QD E+ K    A
Sbjct: 792  RRPSPPRSAGPVFSRSVIDSLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNA 851

Query: 54   QEAASLAEQNSSKLTEAK 1
            QEA  LA + SSK T AK
Sbjct: 852  QEADLLALEESSKCTVAK 869


>ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/85 (47%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
 Frame = -3

Query: 234  RKPSPPRSPVH-------AFSKSAVDTLKKTNELLNLEIFNLQNELKSLRQKSEIQDVEL 76
            R+PSPPRS          +FSKS  D+LKKTNELLN E+  L+ ++++LRQ+ E+Q++EL
Sbjct: 800  RRPSPPRSATPIPTTSGLSFSKSITDSLKKTNELLNQEVLKLRGQVETLRQRCELQELEL 859

Query: 75   HKSEVRAQEAASLAEQNSSKLTEAK 1
             +S  +AQEA ++A + S+K   AK
Sbjct: 860  QRSTKKAQEAMAVAAEESAKSKAAK 884


>emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
 Frame = -3

Query: 234 RKPSPPRS--PVH-----AFSKSAVDTLKKTNELLNLEIFNLQNELKSLRQKSEIQDVEL 76
           RKPSPPRS  PV      +FSKS  D+LKKTNELLN E+  L+ +++SLR++ E+Q++EL
Sbjct: 581 RKPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQVESLRERCELQELEL 640

Query: 75  HKSEVRAQEAASLAEQNSSKLTEAK 1
            KS  + QEA  +A + S+K   AK
Sbjct: 641 QKSAKKVQEAMVVATEESAKSKAAK 665


>ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
 Frame = -3

Query: 234  RKPSPPRS--PVH-----AFSKSAVDTLKKTNELLNLEIFNLQNELKSLRQKSEIQDVEL 76
            RKPSPPRS  PV      +FSKS  D+LKKTNELLN E+  L+ +++SLR++ E+Q++EL
Sbjct: 800  RKPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQVESLRERCELQELEL 859

Query: 75   HKSEVRAQEAASLAEQNSSKLTEAK 1
             KS  + QEA  +A + S+K   AK
Sbjct: 860  QKSAKKVQEAMVVATEESAKSKAAK 884


Top