BLASTX nr result
ID: Coptis25_contig00041452
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041452 (432 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273337.1| PREDICTED: uncharacterized protein LOC100240... 57 2e-06 ref|XP_003554235.1| PREDICTED: uncharacterized protein LOC100775... 56 3e-06 ref|XP_002320387.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 ref|XP_002524796.1| conserved hypothetical protein [Ricinus comm... 56 3e-06 ref|XP_004148871.1| PREDICTED: uncharacterized protein LOC101218... 55 6e-06 >ref|XP_002273337.1| PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera] gi|296086680|emb|CBI32315.3| unnamed protein product [Vitis vinifera] Length = 215 Score = 57.0 bits (136), Expect = 2e-06 Identities = 38/101 (37%), Positives = 55/101 (54%) Frame = -1 Query: 303 LSTSINTHLFKFPATLFITRNNSIKLSGFCKREERIPKFIASSNSVDTQTVXXXXXXXED 124 ++T I T P + T ++ + + F + RI A+SN VDTQTV Sbjct: 1 MNTIIPTSFCHCPISKLGTTFSTPRYTQFRTKTTRIH---ANSNEVDTQTVEERTEEESQ 57 Query: 123 IKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTASR 1 + + ++ ++KDLKKVVQKTAATFAPRASTA++ Sbjct: 58 NNGASNISTPSSTAPALDKDLKKVVQKTAATFAPRASTATK 98 >ref|XP_003554235.1| PREDICTED: uncharacterized protein LOC100775266 [Glycine max] Length = 236 Score = 56.2 bits (134), Expect = 3e-06 Identities = 29/61 (47%), Positives = 42/61 (68%) Frame = -1 Query: 183 ASSNSVDTQTVXXXXXXXEDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 4 A+S+ VDTQTV + ++++ ++ S I+K+LKKV QKTAATFAPRASTA+ Sbjct: 59 ATSDEVDTQTVVEELAEEKKVEENTNEDNTSTFSSPIDKELKKVAQKTAATFAPRASTAT 118 Query: 3 R 1 + Sbjct: 119 K 119 >ref|XP_002320387.1| predicted protein [Populus trichocarpa] gi|222861160|gb|EEE98702.1| predicted protein [Populus trichocarpa] Length = 227 Score = 56.2 bits (134), Expect = 3e-06 Identities = 32/60 (53%), Positives = 41/60 (68%) Frame = -1 Query: 180 SSNSVDTQTVXXXXXXXEDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTASR 1 ++N VDTQT +Q S++S+A I+KDLKKVVQKTAATFAPRASTA++ Sbjct: 54 NANEVDTQTAKEDQATETS---NQVSSSSSAAPPAIDKDLKKVVQKTAATFAPRASTATK 110 >ref|XP_002524796.1| conserved hypothetical protein [Ricinus communis] gi|223535980|gb|EEF37639.1| conserved hypothetical protein [Ricinus communis] Length = 228 Score = 55.8 bits (133), Expect = 3e-06 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 12/117 (10%) Frame = -1 Query: 315 MYPLLSTSI-NTHLFKFP--ATLFITRNNSIKLSGFCKREERIP--KFIASSNSVDTQTV 151 M L+S+S N H+ K P +T F R++ C I K A++N VDTQ Sbjct: 1 MNSLVSSSFCNYHITKLPLTSTRFRCRHS------LCNTHLSIKNLKVRANTNEVDTQIA 54 Query: 150 XXXXXXXEDIKDSQPSTASAAGGS-------DIEKDLKKVVQKTAATFAPRASTASR 1 +++ T+ + S DI+KDLKK VQKTAATFAPRASTA++ Sbjct: 55 AEESEQELKLEEKLNETSKVSSSSSSTVPALDIDKDLKKAVQKTAATFAPRASTATK 111 >ref|XP_004148871.1| PREDICTED: uncharacterized protein LOC101218251 [Cucumis sativus] gi|449491541|ref|XP_004158931.1| PREDICTED: uncharacterized protein LOC101231741 [Cucumis sativus] Length = 221 Score = 55.1 bits (131), Expect = 6e-06 Identities = 30/61 (49%), Positives = 36/61 (59%) Frame = -1 Query: 183 ASSNSVDTQTVXXXXXXXEDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 4 A+SN + TQ V I A+ ++KDLKKVVQKTAATFAPRASTAS Sbjct: 40 ANSNDLQTQAVEEPKEEENGIAAEPQQQTKASSAPALDKDLKKVVQKTAATFAPRASTAS 99 Query: 3 R 1 + Sbjct: 100 K 100