BLASTX nr result

ID: Coptis25_contig00041452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041452
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273337.1| PREDICTED: uncharacterized protein LOC100240...    57   2e-06
ref|XP_003554235.1| PREDICTED: uncharacterized protein LOC100775...    56   3e-06
ref|XP_002320387.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002524796.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|XP_004148871.1| PREDICTED: uncharacterized protein LOC101218...    55   6e-06

>ref|XP_002273337.1| PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera]
           gi|296086680|emb|CBI32315.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/101 (37%), Positives = 55/101 (54%)
 Frame = -1

Query: 303 LSTSINTHLFKFPATLFITRNNSIKLSGFCKREERIPKFIASSNSVDTQTVXXXXXXXED 124
           ++T I T     P +   T  ++ + + F  +  RI    A+SN VDTQTV         
Sbjct: 1   MNTIIPTSFCHCPISKLGTTFSTPRYTQFRTKTTRIH---ANSNEVDTQTVEERTEEESQ 57

Query: 123 IKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTASR 1
              +   +  ++    ++KDLKKVVQKTAATFAPRASTA++
Sbjct: 58  NNGASNISTPSSTAPALDKDLKKVVQKTAATFAPRASTATK 98


>ref|XP_003554235.1| PREDICTED: uncharacterized protein LOC100775266 [Glycine max]
          Length = 236

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/61 (47%), Positives = 42/61 (68%)
 Frame = -1

Query: 183 ASSNSVDTQTVXXXXXXXEDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 4
           A+S+ VDTQTV       + ++++     ++   S I+K+LKKV QKTAATFAPRASTA+
Sbjct: 59  ATSDEVDTQTVVEELAEEKKVEENTNEDNTSTFSSPIDKELKKVAQKTAATFAPRASTAT 118

Query: 3   R 1
           +
Sbjct: 119 K 119


>ref|XP_002320387.1| predicted protein [Populus trichocarpa] gi|222861160|gb|EEE98702.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -1

Query: 180 SSNSVDTQTVXXXXXXXEDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTASR 1
           ++N VDTQT             +Q S++S+A    I+KDLKKVVQKTAATFAPRASTA++
Sbjct: 54  NANEVDTQTAKEDQATETS---NQVSSSSSAAPPAIDKDLKKVVQKTAATFAPRASTATK 110


>ref|XP_002524796.1| conserved hypothetical protein [Ricinus communis]
           gi|223535980|gb|EEF37639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
 Frame = -1

Query: 315 MYPLLSTSI-NTHLFKFP--ATLFITRNNSIKLSGFCKREERIP--KFIASSNSVDTQTV 151
           M  L+S+S  N H+ K P  +T F  R++       C     I   K  A++N VDTQ  
Sbjct: 1   MNSLVSSSFCNYHITKLPLTSTRFRCRHS------LCNTHLSIKNLKVRANTNEVDTQIA 54

Query: 150 XXXXXXXEDIKDSQPSTASAAGGS-------DIEKDLKKVVQKTAATFAPRASTASR 1
                    +++    T+  +  S       DI+KDLKK VQKTAATFAPRASTA++
Sbjct: 55  AEESEQELKLEEKLNETSKVSSSSSSTVPALDIDKDLKKAVQKTAATFAPRASTATK 111


>ref|XP_004148871.1| PREDICTED: uncharacterized protein LOC101218251 [Cucumis sativus]
           gi|449491541|ref|XP_004158931.1| PREDICTED:
           uncharacterized protein LOC101231741 [Cucumis sativus]
          Length = 221

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -1

Query: 183 ASSNSVDTQTVXXXXXXXEDIKDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 4
           A+SN + TQ V         I         A+    ++KDLKKVVQKTAATFAPRASTAS
Sbjct: 40  ANSNDLQTQAVEEPKEEENGIAAEPQQQTKASSAPALDKDLKKVVQKTAATFAPRASTAS 99

Query: 3   R 1
           +
Sbjct: 100 K 100


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