BLASTX nr result
ID: Coptis25_contig00041437
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041437 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g1... 215 3e-54 emb|CBI39785.3| unnamed protein product [Vitis vinifera] 215 3e-54 emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera] 215 3e-54 ref|XP_002522801.1| ring finger protein, putative [Ricinus commu... 205 4e-51 ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|2... 204 5e-51 >ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera] Length = 312 Score = 215 bits (548), Expect = 3e-54 Identities = 104/164 (63%), Positives = 118/164 (71%) Frame = +3 Query: 3 LLYWRYRHSNITQGNDFRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVF 182 LLYWRY+ QG+ F LPD++Q R EESR S L NK RT LELFFAIWFVMGNVWVF Sbjct: 106 LLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVF 165 Query: 183 DSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDR 362 DSRFGS RAPKLHVLCI+LLAWNAISYS + N LGYNMNMGS+D+ Sbjct: 166 DSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDK 225 Query: 363 GATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494 GA+DDQIS LPSW +KE ANL+L + A+ NS +E ECCIC Sbjct: 226 GASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCIC 269 >emb|CBI39785.3| unnamed protein product [Vitis vinifera] Length = 343 Score = 215 bits (548), Expect = 3e-54 Identities = 104/164 (63%), Positives = 118/164 (71%) Frame = +3 Query: 3 LLYWRYRHSNITQGNDFRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVF 182 LLYWRY+ QG+ F LPD++Q R EESR S L NK RT LELFFAIWFVMGNVWVF Sbjct: 137 LLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVF 196 Query: 183 DSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDR 362 DSRFGS RAPKLHVLCI+LLAWNAISYS + N LGYNMNMGS+D+ Sbjct: 197 DSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDK 256 Query: 363 GATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494 GA+DDQIS LPSW +KE ANL+L + A+ NS +E ECCIC Sbjct: 257 GASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCIC 300 >emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera] Length = 343 Score = 215 bits (548), Expect = 3e-54 Identities = 104/164 (63%), Positives = 118/164 (71%) Frame = +3 Query: 3 LLYWRYRHSNITQGNDFRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVF 182 LLYWRY+ QG+ F LPD++Q R EESR S L NK RT LELFFAIWFVMGNVWVF Sbjct: 137 LLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVF 196 Query: 183 DSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDR 362 DSRFGS RAPKLHVLCI+LLAWNAISYS + N LGYNMNMGS+D+ Sbjct: 197 DSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDK 256 Query: 363 GATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494 GA+DDQIS LPSW +KE ANL+L + A+ NS +E ECCIC Sbjct: 257 GASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCIC 300 >ref|XP_002522801.1| ring finger protein, putative [Ricinus communis] gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis] Length = 323 Score = 205 bits (521), Expect = 4e-51 Identities = 98/164 (59%), Positives = 115/164 (70%) Frame = +3 Query: 3 LLYWRYRHSNITQGNDFRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVF 182 L+Y RYR ++ QG+ F L D++Q R E+SRC+ L NK RT LELFFAIWFVMGNVWVF Sbjct: 117 LVYGRYRQVHVVQGDSFGLSDLEQQRGSEDSRCTHLMNKCRTSLELFFAIWFVMGNVWVF 176 Query: 183 DSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDR 362 DSRFGS +RAPKLHVLCISLLAWNA+SYS I + LGYNM MGS +R Sbjct: 177 DSRFGSFNRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMQMGSAER 236 Query: 363 GATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494 GA+DDQIS LPSW YK V+ N E+ +C S N+ ECCIC Sbjct: 237 GASDDQISRLPSWKYKAVDTNSEVASNIDCTSTLANDDPECCIC 280 >ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa] Length = 341 Score = 204 bits (520), Expect = 5e-51 Identities = 104/167 (62%), Positives = 115/167 (68%), Gaps = 3/167 (1%) Frame = +3 Query: 3 LLYWRYRHSNITQGNDFRLPDVQQDRIYEES---RCSRLANKSRTFLELFFAIWFVMGNV 173 LLY RYR N TQ + F LPD++Q R EES RCS L +K RT LELFFAIWFVMGNV Sbjct: 132 LLYGRYRQINTTQADGFGLPDLEQQRGSEESSVCRCSILMHKCRTSLELFFAIWFVMGNV 191 Query: 174 WVFDSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGS 353 WVFDSRFGS RAPKLHVLCISLLAWNA+SYS I LGYNMNMGS Sbjct: 192 WVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVLGYNMNMGS 251 Query: 354 IDRGATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494 +RGA+DDQIS LPSW YK + N E + A+CNS +E ECCIC Sbjct: 252 AERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIASEDLECCIC 298