BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041437
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   215   3e-54
emb|CBI39785.3| unnamed protein product [Vitis vinifera]              215   3e-54
emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]   215   3e-54
ref|XP_002522801.1| ring finger protein, putative [Ricinus commu...   205   4e-51
ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51

>ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
          Length = 312

 Score =  215 bits (548), Expect = 3e-54
 Identities = 104/164 (63%), Positives = 118/164 (71%)
 Frame = +3

Query: 3   LLYWRYRHSNITQGNDFRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVF 182
           LLYWRY+     QG+ F LPD++Q R  EESR S L NK RT LELFFAIWFVMGNVWVF
Sbjct: 106 LLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVF 165

Query: 183 DSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDR 362
           DSRFGS  RAPKLHVLCI+LLAWNAISYS               + N LGYNMNMGS+D+
Sbjct: 166 DSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDK 225

Query: 363 GATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494
           GA+DDQIS LPSW +KE  ANL+L + A+ NS   +E  ECCIC
Sbjct: 226 GASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCIC 269


>emb|CBI39785.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  215 bits (548), Expect = 3e-54
 Identities = 104/164 (63%), Positives = 118/164 (71%)
 Frame = +3

Query: 3   LLYWRYRHSNITQGNDFRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVF 182
           LLYWRY+     QG+ F LPD++Q R  EESR S L NK RT LELFFAIWFVMGNVWVF
Sbjct: 137 LLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVF 196

Query: 183 DSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDR 362
           DSRFGS  RAPKLHVLCI+LLAWNAISYS               + N LGYNMNMGS+D+
Sbjct: 197 DSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDK 256

Query: 363 GATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494
           GA+DDQIS LPSW +KE  ANL+L + A+ NS   +E  ECCIC
Sbjct: 257 GASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCIC 300


>emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
          Length = 343

 Score =  215 bits (548), Expect = 3e-54
 Identities = 104/164 (63%), Positives = 118/164 (71%)
 Frame = +3

Query: 3   LLYWRYRHSNITQGNDFRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVF 182
           LLYWRY+     QG+ F LPD++Q R  EESR S L NK RT LELFFAIWFVMGNVWVF
Sbjct: 137 LLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVF 196

Query: 183 DSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDR 362
           DSRFGS  RAPKLHVLCI+LLAWNAISYS               + N LGYNMNMGS+D+
Sbjct: 197 DSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDK 256

Query: 363 GATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494
           GA+DDQIS LPSW +KE  ANL+L + A+ NS   +E  ECCIC
Sbjct: 257 GASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCIC 300


>ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
           gi|223538039|gb|EEF39652.1| ring finger protein,
           putative [Ricinus communis]
          Length = 323

 Score =  205 bits (521), Expect = 4e-51
 Identities = 98/164 (59%), Positives = 115/164 (70%)
 Frame = +3

Query: 3   LLYWRYRHSNITQGNDFRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVF 182
           L+Y RYR  ++ QG+ F L D++Q R  E+SRC+ L NK RT LELFFAIWFVMGNVWVF
Sbjct: 117 LVYGRYRQVHVVQGDSFGLSDLEQQRGSEDSRCTHLMNKCRTSLELFFAIWFVMGNVWVF 176

Query: 183 DSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDR 362
           DSRFGS +RAPKLHVLCISLLAWNA+SYS               I + LGYNM MGS +R
Sbjct: 177 DSRFGSFNRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMQMGSAER 236

Query: 363 GATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494
           GA+DDQIS LPSW YK V+ N E+    +C S   N+  ECCIC
Sbjct: 237 GASDDQISRLPSWKYKAVDTNSEVASNIDCTSTLANDDPECCIC 280


>ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|222846141|gb|EEE83688.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  204 bits (520), Expect = 5e-51
 Identities = 104/167 (62%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
 Frame = +3

Query: 3   LLYWRYRHSNITQGNDFRLPDVQQDRIYEES---RCSRLANKSRTFLELFFAIWFVMGNV 173
           LLY RYR  N TQ + F LPD++Q R  EES   RCS L +K RT LELFFAIWFVMGNV
Sbjct: 132 LLYGRYRQINTTQADGFGLPDLEQQRGSEESSVCRCSILMHKCRTSLELFFAIWFVMGNV 191

Query: 174 WVFDSRFGSLDRAPKLHVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGS 353
           WVFDSRFGS  RAPKLHVLCISLLAWNA+SYS               I   LGYNMNMGS
Sbjct: 192 WVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVLGYNMNMGS 251

Query: 354 IDRGATDDQISGLPSWSYKEVEANLELGDEAECNSDAENEASECCIC 494
            +RGA+DDQIS LPSW YK  + N E  + A+CNS   +E  ECCIC
Sbjct: 252 AERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIASEDLECCIC 298