BLASTX nr result
ID: Coptis25_contig00041436
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041436 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002879456.1| hypothetical protein ARALYDRAFT_902425 [Arab... 56 3e-06 ref|XP_002304657.1| predicted protein [Populus trichocarpa] gi|2... 55 5e-06 >ref|XP_002879456.1| hypothetical protein ARALYDRAFT_902425 [Arabidopsis lyrata subsp. lyrata] gi|297325295|gb|EFH55715.1| hypothetical protein ARALYDRAFT_902425 [Arabidopsis lyrata subsp. lyrata] Length = 183 Score = 55.8 bits (133), Expect = 3e-06 Identities = 34/78 (43%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = -3 Query: 233 MEAPDMASIT-ALERSLQNCSLXXXXXXXXXXXXXXXGIXXXXXXXXXXXXXXXXXSHVS 57 M+AP+M +IT +LE+S+QNCSL SH+S Sbjct: 1 MKAPNMETITESLEKSMQNCSLNDRRRRVVGDGFGRSS---SNEHTPISDRTLELNSHLS 57 Query: 56 LPYHWEQCLDLKTGEIYY 3 LP HWEQCLDLKTGEIYY Sbjct: 58 LPCHWEQCLDLKTGEIYY 75 >ref|XP_002304657.1| predicted protein [Populus trichocarpa] gi|222842089|gb|EEE79636.1| predicted protein [Populus trichocarpa] Length = 177 Score = 55.5 bits (132), Expect = 5e-06 Identities = 36/78 (46%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = -3 Query: 218 MASITA-LERSLQNCSLXXXXXXXXXXXXXXXG-----IXXXXXXXXXXXXXXXXXSHVS 57 MA+ITA LERSLQNCSL SH+S Sbjct: 1 MAAITASLERSLQNCSLNHHRHHQSSGGREERSSSSDETDSQNHLLQNSDTSLELKSHLS 60 Query: 56 LPYHWEQCLDLKTGEIYY 3 LPYHWEQCLDLKTGEIYY Sbjct: 61 LPYHWEQCLDLKTGEIYY 78