BLASTX nr result

ID: Coptis25_contig00041430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041430
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889653.1| hypothetical protein ARALYDRAFT_470787 [Arab...    94   9e-18
ref|NP_563791.1| putative protein phosphatase 2C 4 [Arabidopsis ...    92   3e-17
gb|AAM61450.1| unknown [Arabidopsis thaliana]                          92   3e-17
gb|AAK32783.1|AF361615_1 At1g07630/F24B9_25 [Arabidopsis thalian...    92   3e-17
ref|XP_004143114.1| PREDICTED: probable protein phosphatase 2C 4...    89   4e-16

>ref|XP_002889653.1| hypothetical protein ARALYDRAFT_470787 [Arabidopsis lyrata subsp.
           lyrata] gi|297335495|gb|EFH65912.1| hypothetical protein
           ARALYDRAFT_470787 [Arabidopsis lyrata subsp. lyrata]
          Length = 663

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 56/110 (50%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   AFESSTSFASIPLQPVPKC----LLKSDSMCRISGFLSGPIERGFVSGPLDKGGMFSGNL 170
           AFES+TSF+SIPLQP+PK     +L S  + R  GFLSGPIERGF+SGPLD+ G+FSG L
Sbjct: 100 AFESTTSFSSIPLQPIPKSSGPIVLGSGPIER--GFLSGPIERGFMSGPLDRVGLFSGPL 157

Query: 171 EKGCDQNKFQXXXXXXXXXXXXXXXXXESLIHGIRKAIAKKMCRGQNSIV 320
           +K    N  Q                  SL+  +R+AI+K M RGQNSIV
Sbjct: 158 DKPNSDNHHQFQRSFSHGLALRVGSRKRSLVRILRRAISKTMSRGQNSIV 207


>ref|NP_563791.1| putative protein phosphatase 2C 4 [Arabidopsis thaliana]
           gi|75180175|sp|Q9LQN6.1|P2C04_ARATH RecName:
           Full=Probable protein phosphatase 2C 4; Short=AtPP2C04;
           AltName: Full=Protein POLTERGEIST-LIKE 5; AltName:
           Full=Protein phosphatase 2C PLL5; Short=PP2C PLL5
           gi|8439909|gb|AAF75095.1|AC007583_31 It contains protein
           phosphatase 2C domain PF|00481. ESTs gb|H36120 and
           gb|36519 come from this gene [Arabidopsis thaliana]
           gi|332190030|gb|AEE28151.1| putative protein phosphatase
           2C 4 [Arabidopsis thaliana]
          Length = 662

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   AFESSTSFASIPLQPVPKC----LLKSDSMCRISGFLSGPIERGFVSGPLDKGGMFSGNL 170
           AFES+TSF+SIPLQP+PK     +L S  + R  GFLSGPIERGF+SGPLD+ G+FSG L
Sbjct: 99  AFESTTSFSSIPLQPIPKSSGPIVLGSGPIER--GFLSGPIERGFMSGPLDRVGLFSGPL 156

Query: 171 EKGCDQNKFQXXXXXXXXXXXXXXXXXESLIHGIRKAIAKKMCRGQNSIV 320
           +K    +  Q                  SL+  +R+AI+K M RGQNSIV
Sbjct: 157 DKPNSDHHHQFQRSFSHGLALRVGSRKRSLVRILRRAISKTMSRGQNSIV 206


>gb|AAM61450.1| unknown [Arabidopsis thaliana]
          Length = 662

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   AFESSTSFASIPLQPVPKC----LLKSDSMCRISGFLSGPIERGFVSGPLDKGGMFSGNL 170
           AFES+TSF+SIPLQP+PK     +L S  + R  GFLSGPIERGF+SGPLD+ G+FSG L
Sbjct: 99  AFESTTSFSSIPLQPIPKSSGPIVLGSGPIER--GFLSGPIERGFMSGPLDRVGLFSGPL 156

Query: 171 EKGCDQNKFQXXXXXXXXXXXXXXXXXESLIHGIRKAIAKKMCRGQNSIV 320
           +K    +  Q                  SL+  +R+AI+K M RGQNSIV
Sbjct: 157 DKPNSDHHHQFQRSFSHGLALRVGSRKRSLVRILRRAISKTMSRGQNSIV 206


>gb|AAK32783.1|AF361615_1 At1g07630/F24B9_25 [Arabidopsis thaliana]
           gi|22137176|gb|AAM91433.1| At1g07630/F24B9_25
           [Arabidopsis thaliana]
          Length = 495

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   AFESSTSFASIPLQPVPKC----LLKSDSMCRISGFLSGPIERGFVSGPLDKGGMFSGNL 170
           AFES+TSF+SIPLQP+PK     +L S  + R  GFLSGPIERGF+SGPLD+ G+FSG L
Sbjct: 99  AFESTTSFSSIPLQPIPKSSGPIVLGSGPIER--GFLSGPIERGFMSGPLDRVGLFSGPL 156

Query: 171 EKGCDQNKFQXXXXXXXXXXXXXXXXXESLIHGIRKAIAKKMCRGQNSIV 320
           +K    +  Q                  SL+  +R+AI+K M RGQNSIV
Sbjct: 157 DKPNSDHHHQFQRSFSHGLALRVGSRKRSLVRILRRAISKTMSRGQNSIV 206


>ref|XP_004143114.1| PREDICTED: probable protein phosphatase 2C 4-like isoform 2
           [Cucumis sativus] gi|449496677|ref|XP_004160196.1|
           PREDICTED: probable protein phosphatase 2C 4-like
           isoform 2 [Cucumis sativus]
          Length = 691

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/117 (46%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
 Frame = +3

Query: 3   AFESSTSFASIPLQPVPKCLLKSDSMCRI-----------SGFLSGPIERGFVSGPLDKG 149
           AFESSTSFASIPLQP+P+ ++ S  +               GFLSGPIERGF+SGPLD+ 
Sbjct: 97  AFESSTSFASIPLQPIPRNMINSGPISGNFSGIPCSGPLERGFLSGPIERGFMSGPLDR- 155

Query: 150 GMFSGNLEKGCDQNKFQXXXXXXXXXXXXXXXXXESLIHGIRKAIAKKMCRGQNSIV 320
           G+FSG L+     N+FQ                   LI  +R AI+K + RGQNSIV
Sbjct: 156 GIFSGPLDNNSTSNEFQRSFSHGAGFNSRSRSRKSRLIRILRTAISKSLHRGQNSIV 212


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