BLASTX nr result

ID: Coptis25_contig00041426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041426
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172586.1| PREDICTED: uncharacterized LOC101208244, par...   116   2e-24
ref|XP_004145562.1| PREDICTED: uncharacterized protein LOC101208...   116   2e-24
ref|XP_002263495.2| PREDICTED: uncharacterized protein LOC100260...   113   1e-23
emb|CBI37490.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_003612433.1| Auxin efflux carrier protein [Medicago trunc...   110   9e-23

>ref|XP_004172586.1| PREDICTED: uncharacterized LOC101208244, partial [Cucumis sativus]
          Length = 366

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/86 (68%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
 Frame = +2

Query: 80  VPLNILITFFIGSILGWLVIHLIIPPPHLRGL--GCCSAGNLVNILLIIVPAVCT*KGSP 253
           +P NILITF +GS+ GW+VI    PPPHLRGL  GCCSAGNL NILLIIVPAVC  KGSP
Sbjct: 22  MPFNILITFIVGSLFGWIVIQWTKPPPHLRGLILGCCSAGNLGNILLIIVPAVCQEKGSP 81

Query: 254 FGDPHVCHTSRMAYASLSMAIIIFFI 331
           FGD   C T  MAY SLSMAI   F+
Sbjct: 82  FGDSDKCTTYGMAYVSLSMAIGAIFL 107


>ref|XP_004145562.1| PREDICTED: uncharacterized protein LOC101208244 [Cucumis sativus]
          Length = 401

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/86 (68%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
 Frame = +2

Query: 80  VPLNILITFFIGSILGWLVIHLIIPPPHLRGL--GCCSAGNLVNILLIIVPAVCT*KGSP 253
           +P NILITF +GS+ GW+VI    PPPHLRGL  GCCSAGNL NILLIIVPAVC  KGSP
Sbjct: 57  MPFNILITFIVGSLFGWIVIQWTKPPPHLRGLILGCCSAGNLGNILLIIVPAVCQEKGSP 116

Query: 254 FGDPHVCHTSRMAYASLSMAIIIFFI 331
           FGD   C T  MAY SLSMAI   F+
Sbjct: 117 FGDSDKCTTYGMAYVSLSMAIGAIFL 142


>ref|XP_002263495.2| PREDICTED: uncharacterized protein LOC100260227 [Vitis vinifera]
          Length = 387

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/81 (71%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = +2

Query: 80  VPLNILITFFIGSILGWLVIHLIIPPPHLRGL--GCCSAGNLVNILLIIVPAVCT*KGSP 253
           +P NILITF IGS LGWL++ L   P HLRGL  GCC+AGNL N+ LIIVPAVC  KGSP
Sbjct: 50  MPFNILITFVIGSALGWLLVKLTRAPQHLRGLVLGCCAAGNLGNLPLIIVPAVCREKGSP 109

Query: 254 FGDPHVCHTSRMAYASLSMAI 316
           FG P VCHT  MAYASLSMAI
Sbjct: 110 FGAPDVCHTYGMAYASLSMAI 130


>emb|CBI37490.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/81 (71%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = +2

Query: 80  VPLNILITFFIGSILGWLVIHLIIPPPHLRGL--GCCSAGNLVNILLIIVPAVCT*KGSP 253
           +P NILITF IGS LGWL++ L   P HLRGL  GCC+AGNL N+ LIIVPAVC  KGSP
Sbjct: 115 MPFNILITFVIGSALGWLLVKLTRAPQHLRGLVLGCCAAGNLGNLPLIIVPAVCREKGSP 174

Query: 254 FGDPHVCHTSRMAYASLSMAI 316
           FG P VCHT  MAYASLSMAI
Sbjct: 175 FGAPDVCHTYGMAYASLSMAI 195


>ref|XP_003612433.1| Auxin efflux carrier protein [Medicago truncatula]
           gi|355513768|gb|AES95391.1| Auxin efflux carrier protein
           [Medicago truncatula]
          Length = 264

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = +2

Query: 62  IISVDRVPLNILITFFIGSILGWLVIHLIIPPPHLRGL--GCCSAGNLVNILLIIVPAVC 235
           ++S+  +P+NIL+TF +GS LGW++I L  PP H+ GL  G CSAGNL N+ +II+PA+C
Sbjct: 69  VVSLWFMPVNILVTFLLGSALGWIIIKLTKPPRHIEGLIVGVCSAGNLGNLPIIIIPAIC 128

Query: 236 T*KGSPFGDPHVCHTSRMAYASLSMAIIIFFI 331
             KGSPFGDP VC+   MAYASLSMAI   FI
Sbjct: 129 KDKGSPFGDPDVCYQFGMAYASLSMAIGAVFI 160


Top