BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041420
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528865.1| PREDICTED: LOW QUALITY PROTEIN: rop guanine ...    92   6e-17
ref|XP_003521141.1| PREDICTED: rop guanine nucleotide exchange f...    92   6e-17
gb|ACU23387.1| unknown [Glycine max]                                   92   6e-17
ref|XP_002320133.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002511862.1| Rop guanine nucleotide exchange factor, puta...    80   2e-13

>ref|XP_003528865.1| PREDICTED: LOW QUALITY PROTEIN: rop guanine nucleotide exchange
           factor 2-like [Glycine max]
          Length = 491

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/107 (50%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
 Frame = +2

Query: 44  PSSSPGEQTDQSNVDTSGYSTLSGDDSFAYCRTSSEISTFSEPTDDNSCADGNSPLRWSI 223
           PS S  +Q D S  +  GYS L   +SFAYCR++SE+S FSEP DDNS A   SP  W+ 
Sbjct: 17  PSPSSVDQNDHSITENVGYSPLFSGESFAYCRSNSEVSNFSEPIDDNSFASEPSPSLWTP 76

Query: 224 SKSVARSHAILTRVEMKQHIDAVKNNSHDPD-----FDMMRERFSKL 349
            K  A S A L+R+ +KQH  +V   S D D      DMMRERFSKL
Sbjct: 77  MKHGA-SQAALSRLGVKQHRHSVDEKSDDLDLLETELDMMRERFSKL 122


>ref|XP_003521141.1| PREDICTED: rop guanine nucleotide exchange factor 2-like [Glycine
           max]
          Length = 481

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
 Frame = +2

Query: 44  PSSSPGEQTDQSNVDTSGYSTLSGDDSFAYCRTSSEISTFSEPTDDNSCA-DGNSPLRWS 220
           PS S  +Q D S  +T GYS L   +SFAYCR++SE+S FSEP DDNS A D  SP  W+
Sbjct: 17  PSPSSVDQNDHSITETVGYSPLLSGESFAYCRSNSEVSNFSEPIDDNSFASDQPSPSLWT 76

Query: 221 ISKSVARSHAILTRVEMKQHIDAVKNNSHDPD-----FDMMRERFSKL 349
             K  A S A L+R+ MKQH +++   S D D      DMMRERF+KL
Sbjct: 77  TMKHGA-SQASLSRLGMKQHRNSLDEKSDDLDLLETELDMMRERFAKL 123


>gb|ACU23387.1| unknown [Glycine max]
          Length = 296

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/107 (50%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
 Frame = +2

Query: 44  PSSSPGEQTDQSNVDTSGYSTLSGDDSFAYCRTSSEISTFSEPTDDNSCADGNSPLRWSI 223
           PS S  +Q D S  +  GYS L   +SFAYCR++SE+S FSEP DDNS A   SP  W+ 
Sbjct: 17  PSPSSVDQNDHSITENVGYSPLFSGESFAYCRSNSEVSNFSEPIDDNSFASEPSPSLWTP 76

Query: 224 SKSVARSHAILTRVEMKQHIDAVKNNSHDPD-----FDMMRERFSKL 349
            K  A S A L+R+ +KQH  +V   S D D      DMMRERFSKL
Sbjct: 77  MKHGA-SQAALSRLGVKQHRHSVDEKSDDLDPLETELDMMRERFSKL 122


>ref|XP_002320133.1| predicted protein [Populus trichocarpa] gi|222860906|gb|EEE98448.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/107 (46%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
 Frame = +2

Query: 44  PSSSPGEQTDQSNVDTSGYSTLSGDDSFAYCRTSSEISTFSEPTDDNSCADGNSPLRWSI 223
           PS S  +Q D   V+T  YST+SGD SF + RT SE S FS+P DDNS +   SP  W +
Sbjct: 17  PSPSSLDQNDHPAVETPVYSTMSGD-SFMFGRTYSETSAFSDPIDDNSYSSEPSPSHWPV 75

Query: 224 SKSVARSHAILTRVEMKQHIDAVKN-----NSHDPDFDMMRERFSKL 349
           +KS A+  A+L R+EMKQ      +      S D + +MM+ERFSKL
Sbjct: 76  TKSGAQHQAMLRRLEMKQQKQVADDKLDDQESVDLELEMMKERFSKL 122


>ref|XP_002511862.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223549042|gb|EEF50531.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 471

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
 Frame = +2

Query: 38  CHPSSSPGEQTDQSNVD---TSGYSTLSGDDSFAYCRTSSEISTFSEPTDDNSCADGNSP 208
           C  SS  G Q   S+ D   T G+ST SGD SF + RT SE ST S+P DDNS +   SP
Sbjct: 7   CDDSSDLGYQPSPSSFDQTETPGFSTTSGD-SFLFRRTYSETSTVSDPIDDNSYSCEPSP 65

Query: 209 LRWSISKSVARSHAILTRVEMKQHIDAVKN-NSHDPDFDMMRERFSKL 349
             W  +KS  R+  +L R+ MKQ +  V +  + D + +MM+ERFSKL
Sbjct: 66  SHWPANKSATRNQPVLGRLGMKQRMHIVDDQETVDSELEMMKERFSKL 113