BLASTX nr result

ID: Coptis25_contig00041406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041406
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX33319.1| secondary cell wall-related glycosyltransferase f...   237   2e-60
ref|XP_002279651.1| PREDICTED: probable beta-1,4-xylosyltransfer...   235   7e-60
gb|ABP65661.1| secondary wall-associated glycosyltransferase fam...   235   7e-60
ref|XP_002326337.1| glycosyl transferase [Populus trichocarpa] g...   233   2e-59
gb|AAX33318.1| secondary cell wall-related glycosyltransferase f...   232   6e-59

>gb|AAX33319.1| secondary cell wall-related glycosyltransferase family 43 [Populus
           tremula x Populus tremuloides]
          Length = 356

 Score =  237 bits (604), Expect = 2e-60
 Identities = 116/209 (55%), Positives = 149/209 (71%), Gaps = 9/209 (4%)
 Frame = -2

Query: 644 PQPSEVLHQETS---------RSLMGEPPVAVPTSTDGNSNPALFAINEDDDADLIPRKQ 492
           PQP E+LHQ+ +         RSL+ E  V  P S+   S+ A F   E+ ++ L PR+ 
Sbjct: 56  PQPVEMLHQQAASAPHASNVNRSLIAETAVPAPPSSK-ESDHATFLEKEETESKLAPRRL 114

Query: 491 LIFISAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRH 312
            I ++      +  QG FLRRLA T+ LVPPPL+WI+VE  SDS E S++LRKTG+MYRH
Sbjct: 115 AIIVTPTST-KDPYQGVFLRRLANTIRLVPPPLLWIVVEGQSDSDEVSEVLRKTGIMYRH 173

Query: 311 LVYKENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEVFGAW 132
           LV+KENFTD +AE+DHQ+N AL HIE HRL+GI+HF  + N YDL FF  +R+IEVFG W
Sbjct: 174 LVFKENFTDPEAELDHQRNVALRHIEKHRLSGIVHFAGLSNVYDLGFFDEIRQIEVFGTW 233

Query: 131 PMAMVSANRKRVVVEGPVCDSFQVIGWHL 45
           PMA++SAN K+V++EGPVCDS QVIGWHL
Sbjct: 234 PMALLSANEKKVIIEGPVCDSSQVIGWHL 262


>ref|XP_002279651.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9 [Vitis
           vinifera]
          Length = 357

 Score =  235 bits (599), Expect = 7e-60
 Identities = 119/223 (53%), Positives = 154/223 (69%), Gaps = 7/223 (3%)
 Frame = -2

Query: 665 VDSQEFSPQPSEVLHQETS-------RSLMGEPPVAVPTSTDGNSNPALFAINEDDDADL 507
           ++  +FSPQP E+LH   +       R+LM E PV VP  +            ED+   L
Sbjct: 49  LNQSQFSPQPVEMLHLSMTPNDGNGNRTLMAETPVEVPARSREVETAESLQEGEDEPK-L 107

Query: 506 IPRKQLIFISAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTG 327
           +P + LI ++      +  +G  LRRLAYTL LVPPPL+WI+VE+ +DSSE S+ILRKTG
Sbjct: 108 VPGRLLIIVTPAGS-EDPSRGVLLRRLAYTLRLVPPPLLWIVVEAQTDSSEVSEILRKTG 166

Query: 326 VMYRHLVYKENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIE 147
           +MYRHLV KENFT+  AEMDHQ+N AL+HIEHH+L+GI+HF  + N YDL FF  +R+IE
Sbjct: 167 IMYRHLVSKENFTEPAAEMDHQRNLALSHIEHHKLSGIVHFAALSNVYDLRFFDEIRDIE 226

Query: 146 VFGAWPMAMVSANRKRVVVEGPVCDSFQVIGWHLVRNLFESST 18
           VFG WPMA +SANR +V++EGPVCDS QVIGWHL +   E+ T
Sbjct: 227 VFGTWPMASLSANRNKVIMEGPVCDSSQVIGWHLKKMNNETET 269


>gb|ABP65661.1| secondary wall-associated glycosyltransferase family 43B [Populus
           tremula x Populus alba]
          Length = 356

 Score =  235 bits (599), Expect = 7e-60
 Identities = 116/209 (55%), Positives = 148/209 (70%), Gaps = 9/209 (4%)
 Frame = -2

Query: 644 PQPSEVLHQETS---------RSLMGEPPVAVPTSTDGNSNPALFAINEDDDADLIPRKQ 492
           PQP E+LHQ+ +         RSL+ E  V  P S+   S+ A F   E+ ++ L PR+ 
Sbjct: 56  PQPVEMLHQQAASAPHASNVNRSLIAETAVPAPPSSK-ESDHATFLEKEETESKLAPRRL 114

Query: 491 LIFISAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRH 312
            I ++      +  QG FLRRLA T+ LVPPPL+WI+VE  SDS E S++LRKTG+MYRH
Sbjct: 115 AIIVTPTST-KDPYQGVFLRRLANTIRLVPPPLLWIVVEGQSDSDEVSEVLRKTGIMYRH 173

Query: 311 LVYKENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEVFGAW 132
           LV+KENFTD +AE+DHQ+N AL HIE HRL+GI+HF  + N YDL FF  +R+IEVFG W
Sbjct: 174 LVFKENFTDPEAELDHQRNVALRHIEKHRLSGIVHFAGLSNVYDLGFFDEIRQIEVFGTW 233

Query: 131 PMAMVSANRKRVVVEGPVCDSFQVIGWHL 45
           PMA++SAN K+V+ EGPVCDS QVIGWHL
Sbjct: 234 PMALLSANEKKVISEGPVCDSSQVIGWHL 262


>ref|XP_002326337.1| glycosyl transferase [Populus trichocarpa]
           gi|222833530|gb|EEE72007.1| glycosyl transferase
           [Populus trichocarpa] gi|333951811|gb|AEG25423.1|
           glycosyltransferase GT43A [Populus trichocarpa]
          Length = 359

 Score =  233 bits (594), Expect = 2e-59
 Identities = 117/209 (55%), Positives = 148/209 (70%), Gaps = 10/209 (4%)
 Frame = -2

Query: 641 QPSEVLHQETS---------RSLMGEPPVAVPTSTDGNSNPALFAINEDDDAD-LIPRKQ 492
           QP E+LHQ+ +         RSL+ E PV  P S+   S PA F   E++    L+PR+ 
Sbjct: 53  QPVEMLHQQVASTPHASNVNRSLIAESPVPTPLSSK-ESEPAKFLEKEEEPKPKLLPRRL 111

Query: 491 LIFISAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRH 312
            I ++ +    +  QG FLRRLA T+ LVPPPL+WI+VE  SDS E S+ILRKTG+MYRH
Sbjct: 112 AIIVTPIST-EDPYQGVFLRRLANTIRLVPPPLLWIVVEGQSDSDEVSEILRKTGIMYRH 170

Query: 311 LVYKENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEVFGAW 132
           LV KENFTD +AE+DHQ+N AL HIE HRL+GI+HF  + N YDL FF  LR+IEVFG W
Sbjct: 171 LVIKENFTDPEAELDHQRNVALRHIEQHRLSGIVHFAGLSNVYDLGFFDELRQIEVFGTW 230

Query: 131 PMAMVSANRKRVVVEGPVCDSFQVIGWHL 45
           P+A++SAN+ +V +EGPVCDS QVIGWHL
Sbjct: 231 PVALLSANKNKVTIEGPVCDSSQVIGWHL 259


>gb|AAX33318.1| secondary cell wall-related glycosyltransferase family 43 [Populus
           tremula x Populus tremuloides]
          Length = 359

 Score =  232 bits (591), Expect = 6e-59
 Identities = 116/209 (55%), Positives = 149/209 (71%), Gaps = 10/209 (4%)
 Frame = -2

Query: 641 QPSEVLHQETS---------RSLMGEPPVAVPTSTDGNSNPALFAINEDD-DADLIPRKQ 492
           Q  E+LHQ+ +         RSL+ E PV  P+S+   S PA F   E++ +  L+PR+ 
Sbjct: 53  QSVEMLHQQVASVPHASNVNRSLIAESPVPTPSSSK-ESEPAKFLEKEEEPEPKLLPRRL 111

Query: 491 LIFISAVKPLSNQLQGAFLRRLAYTLSLVPPPLVWIIVESYSDSSETSDILRKTGVMYRH 312
            I ++ +    +  QG FLRRLA T+ LVPPPL+WI+VE  SDS E S+ILRKTG+MYRH
Sbjct: 112 AIIVTPIST-EDPYQGVFLRRLANTVKLVPPPLLWIVVEGQSDSDEVSEILRKTGIMYRH 170

Query: 311 LVYKENFTDSKAEMDHQKNFALNHIEHHRLNGILHFGDIFNTYDLDFFQALREIEVFGAW 132
           LV KENFTD +AE+DHQ+N AL HIE HRL+GI+HF  + N YDL FF  LR+IEVFG W
Sbjct: 171 LVIKENFTDPEAELDHQRNVALRHIEQHRLSGIVHFAGLSNVYDLGFFDELRQIEVFGTW 230

Query: 131 PMAMVSANRKRVVVEGPVCDSFQVIGWHL 45
           P+A++SAN+ +V +EGPVCDS QVIGWHL
Sbjct: 231 PVALLSANKNKVTIEGPVCDSSQVIGWHL 259


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