BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041405
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...    66   3e-09
ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2...    58   7e-07
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...    55   6e-06
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...    55   8e-06

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 27/46 (58%), Positives = 39/46 (84%)
 Frame = -3

Query: 192 QPIKPYIISEWKSIIKGWICSMISVYCLSILVPRVGKFSSVLSVVN 55
           + IKPY++SE+K I+KGW CS++SVY LS +VP+VGKFS+ LS ++
Sbjct: 155 EAIKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKID 200


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 27/46 (58%), Positives = 39/46 (84%)
 Frame = -3

Query: 192 QPIKPYIISEWKSIIKGWICSMISVYCLSILVPRVGKFSSVLSVVN 55
           + IKPY++SE+K I+KGW CS++SVY LS +VP+VGKFS+ LS ++
Sbjct: 61  EAIKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKID 106


>ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Cucumis sativus] gi|449522662|ref|XP_004168345.1|
           PREDICTED: ABC transporter B family member 29,
           chloroplastic-like [Cucumis sativus]
          Length = 643

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/42 (52%), Positives = 36/42 (85%)
 Frame = -3

Query: 180 PYIISEWKSIIKGWICSMISVYCLSILVPRVGKFSSVLSVVN 55
           PYI+S+ K I+ GW+CS++SV+ LS++VP++GKFSS++  V+
Sbjct: 80  PYILSQRKHILAGWLCSVVSVFSLSLIVPKIGKFSSIIDKVD 121


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/47 (48%), Positives = 37/47 (78%)
 Frame = -3

Query: 186 IKPYIISEWKSIIKGWICSMISVYCLSILVPRVGKFSSVLSVVNMNR 46
           IKPY++S+ K+I+ GW+CS+ISV  LS +VPR+G+FS+ +  ++  R
Sbjct: 82  IKPYVLSQQKTILLGWLCSVISVLSLSQIVPRIGQFSANIGKIDALR 128


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = -3

Query: 186 IKPYIISEWKSIIKGWICSMISVYCLSILVPRVGKFSSVLSVVN 55
           IKP+I S++K I+ GW+CS++SV  LS LVP+ G+FSS +  +N
Sbjct: 4   IKPFIFSQYKPILLGWLCSLLSVLSLSQLVPKFGQFSSSIGKIN 47