BLASTX nr result

ID: Coptis25_contig00041392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041392
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-l...   168   4e-40
ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i...   164   5e-39
ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i...   164   5e-39
gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]           164   9e-39

>ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/102 (75%), Positives = 89/102 (87%)
 Frame = -1

Query: 306 WGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRA 127
           WGL+EGS ERE++K +VH R A +LQDLCF+NGG+YIKLGQH+ QLEYLVP EYV TMR 
Sbjct: 66  WGLLEGSSERERIKHEVHLRSAQKLQDLCFKNGGVYIKLGQHLGQLEYLVPEEYVRTMRE 125

Query: 126 TMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1
           +MLN+CPVSSYEQVC VFKKELG  PD+IF EFDPVP+ASAS
Sbjct: 126 SMLNRCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIASAS 167


>ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|222851038|gb|EEE88585.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/102 (76%), Positives = 89/102 (87%)
 Frame = -1

Query: 306 WGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRA 127
           WGL EGSVE+ KVK +VH R A +LQ+LCF+NGGIYIKLGQH+ QLEYLVP EYV TMR 
Sbjct: 68  WGLSEGSVEKAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHLGQLEYLVPEEYVQTMRE 127

Query: 126 TMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1
           +MLNKCPVSSY+QVC+VFKKELG  PD+IF EFDPVP+ASAS
Sbjct: 128 SMLNKCPVSSYDQVCEVFKKELGETPDKIFEEFDPVPIASAS 169


>ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis
           vinifera]
          Length = 549

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/102 (73%), Positives = 88/102 (86%)
 Frame = -1

Query: 306 WGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRA 127
           +GL+EGS ER + K +VH RCA RLQ+LCFRNGG+YIKLGQHI QLEYLVP EYV  MR 
Sbjct: 68  FGLLEGSPERSRAKHEVHVRCARRLQELCFRNGGLYIKLGQHIGQLEYLVPQEYVQIMRE 127

Query: 126 TMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1
           +MLN+CPVSSYEQVC+VFKKELG  PDE+F EF+P+P+ASAS
Sbjct: 128 SMLNRCPVSSYEQVCEVFKKELGRTPDEVFDEFEPIPIASAS 169


>ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis
           vinifera] gi|297736618|emb|CBI25489.3| unnamed protein
           product [Vitis vinifera]
          Length = 538

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/102 (73%), Positives = 88/102 (86%)
 Frame = -1

Query: 306 WGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRA 127
           +GL+EGS ER + K +VH RCA RLQ+LCFRNGG+YIKLGQHI QLEYLVP EYV  MR 
Sbjct: 68  FGLLEGSPERSRAKHEVHVRCARRLQELCFRNGGLYIKLGQHIGQLEYLVPQEYVQIMRE 127

Query: 126 TMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1
           +MLN+CPVSSYEQVC+VFKKELG  PDE+F EF+P+P+ASAS
Sbjct: 128 SMLNRCPVSSYEQVCEVFKKELGRTPDEVFDEFEPIPIASAS 169


>gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]
          Length = 538

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/101 (75%), Positives = 87/101 (86%)
 Frame = -1

Query: 303 GLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRAT 124
           GL EGS ER KVK +VH R A +LQ+LCF+NGGIYIKLGQHI QLEYLVP EYV TMR +
Sbjct: 69  GLAEGSSERAKVKHEVHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRTMRES 128

Query: 123 MLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1
           MLNKCP+SSYEQVC+VFKKE+G  PD++F EFDPVP+ASAS
Sbjct: 129 MLNKCPISSYEQVCEVFKKEVGEMPDQVFAEFDPVPIASAS 169


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