BLASTX nr result
ID: Coptis25_contig00041392
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041392 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-l... 168 4e-40 ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|2... 167 8e-40 ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i... 164 5e-39 ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i... 164 5e-39 gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana] 164 9e-39 >ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max] Length = 541 Score = 168 bits (426), Expect = 4e-40 Identities = 77/102 (75%), Positives = 89/102 (87%) Frame = -1 Query: 306 WGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRA 127 WGL+EGS ERE++K +VH R A +LQDLCF+NGG+YIKLGQH+ QLEYLVP EYV TMR Sbjct: 66 WGLLEGSSERERIKHEVHLRSAQKLQDLCFKNGGVYIKLGQHLGQLEYLVPEEYVRTMRE 125 Query: 126 TMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1 +MLN+CPVSSYEQVC VFKKELG PD+IF EFDPVP+ASAS Sbjct: 126 SMLNRCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIASAS 167 >ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|222851038|gb|EEE88585.1| predicted protein [Populus trichocarpa] Length = 512 Score = 167 bits (423), Expect = 8e-40 Identities = 78/102 (76%), Positives = 89/102 (87%) Frame = -1 Query: 306 WGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRA 127 WGL EGSVE+ KVK +VH R A +LQ+LCF+NGGIYIKLGQH+ QLEYLVP EYV TMR Sbjct: 68 WGLSEGSVEKAKVKHEVHLRSARKLQELCFKNGGIYIKLGQHLGQLEYLVPEEYVQTMRE 127 Query: 126 TMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1 +MLNKCPVSSY+QVC+VFKKELG PD+IF EFDPVP+ASAS Sbjct: 128 SMLNKCPVSSYDQVCEVFKKELGETPDKIFEEFDPVPIASAS 169 >ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis vinifera] Length = 549 Score = 164 bits (416), Expect = 5e-39 Identities = 75/102 (73%), Positives = 88/102 (86%) Frame = -1 Query: 306 WGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRA 127 +GL+EGS ER + K +VH RCA RLQ+LCFRNGG+YIKLGQHI QLEYLVP EYV MR Sbjct: 68 FGLLEGSPERSRAKHEVHVRCARRLQELCFRNGGLYIKLGQHIGQLEYLVPQEYVQIMRE 127 Query: 126 TMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1 +MLN+CPVSSYEQVC+VFKKELG PDE+F EF+P+P+ASAS Sbjct: 128 SMLNRCPVSSYEQVCEVFKKELGRTPDEVFDEFEPIPIASAS 169 >ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis vinifera] gi|297736618|emb|CBI25489.3| unnamed protein product [Vitis vinifera] Length = 538 Score = 164 bits (416), Expect = 5e-39 Identities = 75/102 (73%), Positives = 88/102 (86%) Frame = -1 Query: 306 WGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRA 127 +GL+EGS ER + K +VH RCA RLQ+LCFRNGG+YIKLGQHI QLEYLVP EYV MR Sbjct: 68 FGLLEGSPERSRAKHEVHVRCARRLQELCFRNGGLYIKLGQHIGQLEYLVPQEYVQIMRE 127 Query: 126 TMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1 +MLN+CPVSSYEQVC+VFKKELG PDE+F EF+P+P+ASAS Sbjct: 128 SMLNRCPVSSYEQVCEVFKKELGRTPDEVFDEFEPIPIASAS 169 >gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana] Length = 538 Score = 164 bits (414), Expect = 9e-39 Identities = 76/101 (75%), Positives = 87/101 (86%) Frame = -1 Query: 303 GLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRAT 124 GL EGS ER KVK +VH R A +LQ+LCF+NGGIYIKLGQHI QLEYLVP EYV TMR + Sbjct: 69 GLAEGSSERAKVKHEVHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRTMRES 128 Query: 123 MLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLASAS 1 MLNKCP+SSYEQVC+VFKKE+G PD++F EFDPVP+ASAS Sbjct: 129 MLNKCPISSYEQVCEVFKKEVGEMPDQVFAEFDPVPIASAS 169