BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041382
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   7e-28
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
emb|CBI39619.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27

>dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 658

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   AKCGCVETAYEVFSKLDHR--NVSTWNALITGLAVNGIAHAALEVFTEMLRLETKPDRIT 174
           AKCG V  A ++FS + H+  +VS WNA+I  LA++G AH +LE+F E+ R   KP+ +T
Sbjct: 455 AKCGSVADAIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQRTNIKPNSVT 514

Query: 175 FLGVLMACCHGGLVEEGRYHFKSMLKDYGIQPELKHYGCMV 297
           ++GVL ACCH GLV EGR+HF+SM ++YGIQP +KHYGCMV
Sbjct: 515 YIGVLNACCHAGLVTEGRHHFESMSREYGIQPTIKHYGCMV 555


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/98 (57%), Positives = 75/98 (76%)
 Frame = +1

Query: 4   KCGCVETAYEVFSKLDHRNVSTWNALITGLAVNGIAHAALEVFTEMLRLETKPDRITFLG 183
           KCGCVETA EVF  +  + +STWNALI GLA+NG+  ++L++F+ M +    P+ ITF+G
Sbjct: 555 KCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMG 614

Query: 184 VLMACCHGGLVEEGRYHFKSMLKDYGIQPELKHYGCMV 297
           VL AC H GLV+EG++HF SM+ D+ IQP +KHYGCMV
Sbjct: 615 VLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMV 652



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/76 (31%), Positives = 42/76 (55%)
 Frame = +1

Query: 4   KCGCVETAYEVFSKLDHRNVSTWNALITGLAVNGIAHAALEVFTEMLRLETKPDRITFLG 183
           KC  V+ A  +F  +  ++V +W+++I+G A N +    L +F EM     KPD  T + 
Sbjct: 454 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 513

Query: 184 VLMACCHGGLVEEGRY 231
           V+ AC     +E+G++
Sbjct: 514 VISACARLAALEQGKW 529


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/98 (57%), Positives = 75/98 (76%)
 Frame = +1

Query: 4   KCGCVETAYEVFSKLDHRNVSTWNALITGLAVNGIAHAALEVFTEMLRLETKPDRITFLG 183
           KCGCVETA EVF  +  + +STWNALI GLA+NG+  ++L++F+ M +    P+ ITF+G
Sbjct: 420 KCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMG 479

Query: 184 VLMACCHGGLVEEGRYHFKSMLKDYGIQPELKHYGCMV 297
           VL AC H GLV+EG++HF SM+ D+ IQP +KHYGCMV
Sbjct: 480 VLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMV 517



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/76 (31%), Positives = 42/76 (55%)
 Frame = +1

Query: 4   KCGCVETAYEVFSKLDHRNVSTWNALITGLAVNGIAHAALEVFTEMLRLETKPDRITFLG 183
           KC  V+ A  +F  +  ++V +W+++I+G A N +    L +F EM     KPD  T + 
Sbjct: 319 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 378

Query: 184 VLMACCHGGLVEEGRY 231
           V+ AC     +E+G++
Sbjct: 379 VISACARLAALEQGKW 394


>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/98 (58%), Positives = 75/98 (76%)
 Frame = +1

Query: 4   KCGCVETAYEVFSKLDHRNVSTWNALITGLAVNGIAHAALEVFTEMLRLETKPDRITFLG 183
           KCGCVE A EVF+ ++ + VS+WNALI GLAVNG+   +L++F+EM      P+ ITF+G
Sbjct: 315 KCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMG 374

Query: 184 VLMACCHGGLVEEGRYHFKSMLKDYGIQPELKHYGCMV 297
           VL AC H GLV+EGR HF SM++ +GI+P +KHYGCMV
Sbjct: 375 VLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMV 412


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/98 (58%), Positives = 75/98 (76%)
 Frame = +1

Query: 4   KCGCVETAYEVFSKLDHRNVSTWNALITGLAVNGIAHAALEVFTEMLRLETKPDRITFLG 183
           KCGCVE A EVF+ ++ + VS+WNALI GLAVNG+   +L++F+EM      P+ ITF+G
Sbjct: 483 KCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMG 542

Query: 184 VLMACCHGGLVEEGRYHFKSMLKDYGIQPELKHYGCMV 297
           VL AC H GLV+EGR HF SM++ +GI+P +KHYGCMV
Sbjct: 543 VLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMV 580



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/75 (34%), Positives = 46/75 (61%)
 Frame = +1

Query: 4   KCGCVETAYEVFSKLDHRNVSTWNALITGLAVNGIAHAALEVFTEMLRLETKPDRITFLG 183
           K G V  A+++F+++D +++ +W+ALI+G   NG+   AL +F EM     + D +  + 
Sbjct: 250 KMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVS 309

Query: 184 VLMACCHGGLVEEGR 228
           VL AC H  +V+ G+
Sbjct: 310 VLSACAHLSIVKTGK 324