BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041376
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256...   136   2e-30
emb|CBI16878.3| unnamed protein product [Vitis vinifera]              136   2e-30
gb|ABK94444.1| unknown [Populus trichocarpa]                          129   2e-28
ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
ref|NP_176889.1| RING-finger and BRCT domain-containing protein ...   126   2e-27

>ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera]
          Length = 503

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 6/112 (5%)
 Frame = +3

Query: 6   ERFKLIKLINYTGASYVGAMTKSTTHLVCWEFEGRKYELAKSFGTKIVSHKWFEDCVEAG 185
           ER  LIKLI+ TGA YVG M++S THLVCW+FEGRKY LAK F T IV+H+WFEDC++AG
Sbjct: 43  ERSNLIKLISQTGAKYVGTMSRSITHLVCWKFEGRKYSLAKKFKTLIVNHRWFEDCIKAG 102

Query: 186 KRLPERHYMMKSGQQAGPILWEVPVAVDEKDDILTRKRGNV------LCDMS 323
           KRLPE  Y+++SGQ+ GP+  EVP+ V EK + LT+K G         CD+S
Sbjct: 103 KRLPENSYLLQSGQEVGPLSLEVPL-VSEKANPLTKKNGRAHSVRGSACDIS 153


>emb|CBI16878.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 6/112 (5%)
 Frame = +3

Query: 6   ERFKLIKLINYTGASYVGAMTKSTTHLVCWEFEGRKYELAKSFGTKIVSHKWFEDCVEAG 185
           ER  LIKLI+ TGA YVG M++S THLVCW+FEGRKY LAK F T IV+H+WFEDC++AG
Sbjct: 15  ERSNLIKLISQTGAKYVGTMSRSITHLVCWKFEGRKYSLAKKFKTLIVNHRWFEDCIKAG 74

Query: 186 KRLPERHYMMKSGQQAGPILWEVPVAVDEKDDILTRKRGNV------LCDMS 323
           KRLPE  Y+++SGQ+ GP+  EVP+ V EK + LT+K G         CD+S
Sbjct: 75  KRLPENSYLLQSGQEVGPLSLEVPL-VSEKANPLTKKNGRAHSVRGSACDIS 125


>gb|ABK94444.1| unknown [Populus trichocarpa]
          Length = 482

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/108 (58%), Positives = 82/108 (75%)
 Frame = +3

Query: 3   SERFKLIKLINYTGASYVGAMTKSTTHLVCWEFEGRKYELAKSFGTKIVSHKWFEDCVEA 182
           SERF LIKLI+ +GASYVGAM+ STTHLVCW+FEGRKYELA  F T +V+H+W E+CV+ 
Sbjct: 14  SERFNLIKLISQSGASYVGAMSNSTTHLVCWKFEGRKYELASKFDTLVVNHRWVEECVKQ 73

Query: 183 GKRLPERHYMMKSGQQAGPILWEVPVAVDEKDDILTRKRGNVLCDMSN 326
           GKR+PE  YM++SGQ+ GP++ +VP  VD+   +   K+   L D SN
Sbjct: 74  GKRVPEYPYMLESGQEVGPLVLDVP-NVDKLGSL--NKKRKPLSDKSN 118


>ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/85 (65%), Positives = 72/85 (84%)
 Frame = +3

Query: 3   SERFKLIKLINYTGASYVGAMTKSTTHLVCWEFEGRKYELAKSFGTKIVSHKWFEDCVEA 182
           SERF LIKLI+ +GASYVGAM+ STTHLVCW+FEGRKYELA  F T +V+H+W E+CV+ 
Sbjct: 14  SERFNLIKLISQSGASYVGAMSNSTTHLVCWKFEGRKYELASKFDTLVVNHRWVEECVKQ 73

Query: 183 GKRLPERHYMMKSGQQAGPILWEVP 257
           GKR+PE  YM++SGQ+ GP++ +VP
Sbjct: 74  GKRVPEYPYMLESGQEVGPLVLDVP 98


>ref|NP_176889.1| RING-finger and BRCT domain-containing protein [Arabidopsis
           thaliana] gi|4204282|gb|AAD10663.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332196488|gb|AEE34609.1|
           RING-finger and BRCT domain-containing protein
           [Arabidopsis thaliana]
          Length = 453

 Score =  126 bits (316), Expect = 2e-27
 Identities = 53/90 (58%), Positives = 75/90 (83%)
 Frame = +3

Query: 3   SERFKLIKLINYTGASYVGAMTKSTTHLVCWEFEGRKYELAKSFGTKIVSHKWFEDCVEA 182
           S+RFKLIKLI+++GASYVGAM++S THLVCW+FEG+KY+LAK FGT +V+H+W E+CV+ 
Sbjct: 14  SDRFKLIKLISHSGASYVGAMSRSITHLVCWKFEGKKYDLAKKFGTVVVNHRWVEECVKE 73

Query: 183 GKRLPERHYMMKSGQQAGPILWEVPVAVDE 272
           G+R+ E  YM  SG++ GP++ E+P   +E
Sbjct: 74  GRRVSETPYMFDSGEEVGPLMIELPAVSEE 103