BLASTX nr result

ID: Coptis25_contig00041352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041352
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147041.1| PREDICTED: uncharacterized protein LOC101219...    64   2e-08
ref|XP_003604042.1| MCM10-like protein [Medicago truncatula] gi|...    62   4e-08
ref|XP_002277777.1| PREDICTED: uncharacterized protein LOC100250...    59   3e-07
ref|XP_003522658.1| PREDICTED: uncharacterized protein LOC100527...    57   2e-06

>ref|XP_004147041.1| PREDICTED: uncharacterized protein LOC101219022 [Cucumis sativus]
           gi|449489650|ref|XP_004158375.1| PREDICTED:
           uncharacterized LOC101219022 [Cucumis sativus]
          Length = 413

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = +1

Query: 1   ALSNASKVTTNARSQGIRFLTELTGKTHPKDPSKRSTLLNKENCCSEKRLSSSMKPSSAT 180
           ALSNA KVTTNA SQG RFL E+TGK   +  +K ST  +++   SEK  +S +K   +T
Sbjct: 310 ALSNADKVTTNAHSQGKRFLAEITGKLTSQSVNKESTKRSQQRINSEK--TSILK---ST 364

Query: 181 VSNKHPEAKRRKTE 222
           V N+ P+ KR+KT+
Sbjct: 365 VENQQPDPKRKKTD 378


>ref|XP_003604042.1| MCM10-like protein [Medicago truncatula]
           gi|355493090|gb|AES74293.1| MCM10-like protein [Medicago
           truncatula]
          Length = 412

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +1

Query: 1   ALSNASKVTTNARSQGIRFLTELTGKTHPKDPSKRSTLLNKENCCSEKRLSSSMKPS-SA 177
           ALSNA KVTT + SQGIRFL+E+ GK  PK   K     N ++ C+ KR SSS+    S+
Sbjct: 311 ALSNAGKVTTASHSQGIRFLSEVAGKFDPKMMKKEPKTPNDQSKCTTKRKSSSVNMGYSS 370

Query: 178 TVSNKHPEAKRRKTE 222
            + N+  + K+ KTE
Sbjct: 371 VIRNQQLDVKKAKTE 385


>ref|XP_002277777.1| PREDICTED: uncharacterized protein LOC100250259 [Vitis vinifera]
          Length = 403

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   ALSNASKVTTNARSQGIRFLTELTGKTHPKDPSKRSTLLNKENCCSEKRLSSSMK-PSSA 177
           ALSNA KVTTNA SQGIRFLTE+TGK   K   + S      N    KR S++++  SSA
Sbjct: 305 ALSNAGKVTTNAHSQGIRFLTEITGKVGSKITKEGS----GPNQQVAKRPSTTIRTDSSA 360

Query: 178 TVSNKHPEAKRRKTEE 225
              N+ P  KR+K E+
Sbjct: 361 VARNQQPGTKRKKMEQ 376


>ref|XP_003522658.1| PREDICTED: uncharacterized protein LOC100527758 [Glycine max]
          Length = 409

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +1

Query: 1   ALSNASKVTTNARSQGIRFLTELTGKTHPKDPSKRSTLLNKENCCSEKRLSSSMK-PSSA 177
           ALSNA KVTT + SQGIRFL+E+  K+ PK  +K S   N +N  +EKR SS     SS 
Sbjct: 308 ALSNAGKVTTASHSQGIRFLSEVAAKSDPKMKNKGSKFPNVQNKWTEKRKSSFPNVGSSP 367

Query: 178 TVSNKHPEAKRRKTE 222
            + N+    KR K +
Sbjct: 368 VIGNRQSGEKRIKPD 382


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