BLASTX nr result
ID: Coptis25_contig00041322
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041322 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi... 197 7e-49 ref|XP_002881503.1| pentatricopeptide repeat-containing protein ... 178 4e-43 ref|NP_181268.1| pentatricopeptide repeat-containing protein [Ar... 176 1e-42 ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containi... 174 5e-42 ref|XP_002525211.1| pentatricopeptide repeat-containing protein,... 174 9e-42 >ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like [Vitis vinifera] Length = 667 Score = 197 bits (501), Expect = 7e-49 Identities = 97/135 (71%), Positives = 112/135 (82%) Frame = -1 Query: 407 EAANFISKMPLEPSAKVWGALLNGVSVSGDVELGKFVCDRLFELEPENSWNYIIMANLYS 228 EAA FI KMP+EP+AKVWGALLNGVSVSGDVELGKFVCD LF +EPEN+ NY+IMANLYS Sbjct: 528 EAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNMEPENTGNYVIMANLYS 587 Query: 227 QAGRWEEAEKVREKMKNMGLKKVPGCSWIETSGGVVSFIAGDGSNPMMEEIFVVLEILVQ 48 QAGRWEEAE +REKMK +GLKK+PG SWIETSGG+ SFIA D S+ EEI+ +LE L+ Sbjct: 588 QAGRWEEAENIREKMKKIGLKKIPGTSWIETSGGLRSFIARDVSSERSEEIYGMLEGLLG 647 Query: 47 MMGKESYVAIVELDE 3 +M +E Y ELDE Sbjct: 648 LMREEGYTLQDELDE 662 >ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 669 Score = 178 bits (452), Expect = 4e-43 Identities = 86/134 (64%), Positives = 105/134 (78%) Frame = -1 Query: 404 AANFISKMPLEPSAKVWGALLNGVSVSGDVELGKFVCDRLFELEPENSWNYIIMANLYSQ 225 A FISKMP+EP AKVWGALLNG SV GDVE+ +F CDRLFE+EPEN+ NY IMANLY+Q Sbjct: 522 AMEFISKMPIEPIAKVWGALLNGASVLGDVEIARFACDRLFEMEPENTGNYTIMANLYTQ 581 Query: 224 AGRWEEAEKVREKMKNMGLKKVPGCSWIETSGGVVSFIAGDGSNPMMEEIFVVLEILVQM 45 AGRWEEAE VR+KMK +GLKK+PG SWIET+ G+ SFIA D S +E++ ++E LV+ Sbjct: 582 AGRWEEAEVVRDKMKRIGLKKIPGTSWIETNKGLRSFIAKDSSCERSKEMYDIIEGLVES 641 Query: 44 MGKESYVAIVELDE 3 M + Y+ ELDE Sbjct: 642 MSDKEYIMKQELDE 655 >ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310 gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana] gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana] gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 657 Score = 176 bits (447), Expect = 1e-42 Identities = 84/135 (62%), Positives = 104/135 (77%) Frame = -1 Query: 407 EAANFISKMPLEPSAKVWGALLNGVSVSGDVELGKFVCDRLFELEPENSWNYIIMANLYS 228 +A FISKMP++P AKVWGALLNG SV GD+E+ +F CDRLFE+EPEN+ NY IMANLY+ Sbjct: 521 DAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYT 580 Query: 227 QAGRWEEAEKVREKMKNMGLKKVPGCSWIETSGGVVSFIAGDGSNPMMEEIFVVLEILVQ 48 QAGRWEEAE VR KMK +GLKK+PG SWIET G+ SFIA D S +E++ ++E LV+ Sbjct: 581 QAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVE 640 Query: 47 MMGKESYVAIVELDE 3 M + Y+ ELDE Sbjct: 641 SMSDKEYIRKQELDE 655 >ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like [Glycine max] Length = 667 Score = 174 bits (442), Expect = 5e-42 Identities = 85/134 (63%), Positives = 107/134 (79%) Frame = -1 Query: 407 EAANFISKMPLEPSAKVWGALLNGVSVSGDVELGKFVCDRLFELEPENSWNYIIMANLYS 228 EA FIS+MP+EPSAKVWG LL+G SV GDVE+GKF CD LFE+EPEN+ NYIIMANLY+ Sbjct: 528 EAVQFISEMPIEPSAKVWGPLLHGASVFGDVEIGKFACDHLFEIEPENTGNYIIMANLYA 587 Query: 227 QAGRWEEAEKVREKMKNMGLKKVPGCSWIETSGGVVSFIAGDGSNPMMEEIFVVLEILVQ 48 AG+WE+A +VRE+MK +GL+K+ G SWIETSGG++SFIA D SN +EI+ +LE L+ Sbjct: 588 HAGKWEQAGEVRERMKVIGLQKIRGSSWIETSGGLLSFIAKDVSNGRSDEIYALLEGLLG 647 Query: 47 MMGKESYVAIVELD 6 +M +E V ELD Sbjct: 648 LMREEGCVLQEELD 661 >ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 654 Score = 174 bits (440), Expect = 9e-42 Identities = 86/135 (63%), Positives = 106/135 (78%) Frame = -1 Query: 407 EAANFISKMPLEPSAKVWGALLNGVSVSGDVELGKFVCDRLFELEPENSWNYIIMANLYS 228 EA F+SKMP+EPSAKVWGALL+G S+S DVELGK VCD LFE+EPEN+ NY+IMANLYS Sbjct: 515 EAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYS 574 Query: 227 QAGRWEEAEKVREKMKNMGLKKVPGCSWIETSGGVVSFIAGDGSNPMMEEIFVVLEILVQ 48 QAGRW+EA++VRE+M +GL+K+PG SWIETS G+ SFIA D +EEI V+L+ L+ Sbjct: 575 QAGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATDTCTENVEEIHVILKGLLG 634 Query: 47 MMGKESYVAIVELDE 3 +M E V LDE Sbjct: 635 LMRDEGKVLQDMLDE 649