BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041321
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   138   4e-31
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...   137   1e-30
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/108 (62%), Positives = 84/108 (77%)
 Frame = +1

Query: 1   AKSGFLHGALQVFTECSPKSVIAWTAIISAFAAHGDADTALTLFSKMCICGVKPDPVTFT 180
           AK G+LHGA  VF +   +S+IAWT+IISA+A HGDA+ AL+LF +M   G++PD VTFT
Sbjct: 388 AKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFT 447

Query: 181 AVLAACVHVGIVDEARQIFDGMLPVYGIHPAVEHYACMVGVLSRARML 324
           +VLAAC H G +DEA +IF+ +LP YGI P VEHYACMVGVLSRA  L
Sbjct: 448 SVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKL 495


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/108 (62%), Positives = 84/108 (77%)
 Frame = +1

Query: 1   AKSGFLHGALQVFTECSPKSVIAWTAIISAFAAHGDADTALTLFSKMCICGVKPDPVTFT 180
           AK G+LHGA  VF +   +S+IAWT+IISA+A HGDA+ AL+LF +M   G++PD VTFT
Sbjct: 388 AKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFT 447

Query: 181 AVLAACVHVGIVDEARQIFDGMLPVYGIHPAVEHYACMVGVLSRARML 324
           +VLAAC H G +DEA +IF+ +LP YGI P VEHYACMVGVLSRA  L
Sbjct: 448 SVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKL 495


>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/108 (64%), Positives = 80/108 (74%)
 Frame = +1

Query: 1   AKSGFLHGALQVFTECSPKSVIAWTAIISAFAAHGDADTALTLFSKMCICGVKPDPVTFT 180
           AK GFL GA  VF +   +S+I WTAIISA++AHGDA+ AL LF  M   G +PDPVTFT
Sbjct: 419 AKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFT 478

Query: 181 AVLAACVHVGIVDEARQIFDGMLPVYGIHPAVEHYACMVGVLSRARML 324
           AVLAAC H G+V+EA +IFD M   YG  P VEHYACMVGVLSRA ML
Sbjct: 479 AVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGML 526


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/108 (60%), Positives = 82/108 (75%)
 Frame = +1

Query: 1   AKSGFLHGALQVFTECSPKSVIAWTAIISAFAAHGDADTALTLFSKMCICGVKPDPVTFT 180
           AKSG+L GA +VF +   +S++ WTAIISA+A HGDA+ AL LF +M   G++PDPVTFT
Sbjct: 406 AKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFT 465

Query: 181 AVLAACVHVGIVDEARQIFDGMLPVYGIHPAVEHYACMVGVLSRARML 324
           AVLAAC H G+VD+A +IF+ M   YGI P VEHYAC+VG L +AR L
Sbjct: 466 AVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRL 513


>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/108 (62%), Positives = 79/108 (73%)
 Frame = +1

Query: 1   AKSGFLHGALQVFTECSPKSVIAWTAIISAFAAHGDADTALTLFSKMCICGVKPDPVTFT 180
           AK GFL GA  VF +   +S+I WTAIISA AAHGDA++ALT F +M   G++PD VTFT
Sbjct: 404 AKLGFLFGAQYVFDQSKERSLIIWTAIISAHAAHGDANSALTFFDEMLSNGIQPDHVTFT 463

Query: 181 AVLAACVHVGIVDEARQIFDGMLPVYGIHPAVEHYACMVGVLSRARML 324
           AVLAAC H G+VD+A +IF+ M   YGI P  EHYACMVGVL RA  L
Sbjct: 464 AVLAACAHCGMVDKAWEIFNSMSKKYGIQPLGEHYACMVGVLGRAGRL 511