BLASTX nr result
ID: Coptis25_contig00041285
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041285 (867 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi... 373 e-101 ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|2... 361 1e-97 ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containi... 359 5e-97 ref|XP_002520317.1| pentatricopeptide repeat-containing protein,... 357 3e-96 gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal... 356 4e-96 >ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Vitis vinifera] Length = 476 Score = 373 bits (957), Expect = e-101 Identities = 175/247 (70%), Positives = 214/247 (86%) Frame = -2 Query: 743 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEEILRKFENAGMQSYRF 564 S + +K+ D K++ KIM+S PKL L++ L+ESGIRVS +VE +L++FENAGM +Y+F Sbjct: 4 SGEIIKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQF 63 Query: 563 FEWVGKQRNYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCVIMRKYAR 384 FEW GKQRNYTHS+ +YHT+I SLAKIRQY++MWD+V+ MRS +LNVETFC+IMRKYAR Sbjct: 64 FEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYAR 123 Query: 383 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFVPDSKTY 204 +Q+V EA+YTFN+MEKY V NLAAFNSLLSA CKSKNV KAQEIF+ MKD+F+PDSKTY Sbjct: 124 SQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTY 183 Query: 203 SILLEGWGKSPNLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVDEAINVVREMDG 24 SILLEGWGK+PNLPKAREIFREM+ GCDPDIVTYGIMVD+LCK GRVDEA+ +V+EMD Sbjct: 184 SILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDS 243 Query: 23 NGCRPTS 3 + C+PTS Sbjct: 244 SVCKPTS 250 Score = 80.1 bits (196), Expect = 6e-13 Identities = 45/167 (26%), Positives = 89/167 (53%), Gaps = 2/167 (1%) Frame = -2 Query: 524 VISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVE-TFCVIMRKYARAQRVDEAIYTFN 348 +++Y ++ L K + +V M S + V++ Y R+++A+YTF Sbjct: 215 IVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFL 274 Query: 347 VMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFV-PDSKTYSILLEGWGKSP 171 ME+ ++ ++A +N+L+ AFCK ++ A + + M + + P+S+T +I+L Sbjct: 275 DMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCG 334 Query: 170 NLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVDEAINVVREM 30 + +A +FR MI CDPD TY +M+ + C+ +++ A+ V + M Sbjct: 335 DTDEAFRVFRRMI-KVCDPDADTYTMMIKMFCENDKLEMALKVWKYM 380 Score = 73.6 bits (179), Expect = 6e-11 Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 3/172 (1%) Frame = -2 Query: 563 FEWVGKQRNYTHSVIS-YHTIIGSLAKIRQYKLMWDVVSSMRSKGVL-NVETFCVIMRKY 390 + ++ +RN + ++ Y+ +IG+ K+ + K + V++ M KG+ N T +I+ Sbjct: 271 YTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSL 330 Query: 389 ARAQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMK-DRFVPDS 213 DEA F M K + + ++ FC++ + A +++ M+ +FVP Sbjct: 331 ISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSM 389 Query: 212 KTYSILLEGWGKSPNLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVD 57 T+S+L+ G K N KA + EMI G P VT+G + +L K GR D Sbjct: 390 HTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGRED 441 >ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa] Length = 440 Score = 361 bits (926), Expect = 1e-97 Identities = 169/228 (74%), Positives = 201/228 (88%) Frame = -2 Query: 689 MMSSPKLSLESILNESGIRVSTELVEEILRKFENAGMQSYRFFEWVGKQRNYTHSVISYH 510 MMSS ++L++ L++SG+RVS ++VE++L+KFENAGM +YRFFEW KQR+Y HSV ++H Sbjct: 1 MMSSSVVTLDTALDQSGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFH 60 Query: 509 TIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCVIMRKYARAQRVDEAIYTFNVMEKYG 330 T+I SLAKIRQY+LMWDVV M+SK ++NVETFC+IMRKYARAQ+V+EA+YTFN+M+KY Sbjct: 61 TVIDSLAKIRQYQLMWDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYD 120 Query: 329 VQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFVPDSKTYSILLEGWGKSPNLPKARE 150 V NLAAFN LLSA CKSKNVRKAQEIFDS+KDRFVPDSKTYSILLEGWGK PNLPKARE Sbjct: 121 VPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKARE 180 Query: 149 IFREMIGNGCDPDIVTYGIMVDVLCKTGRVDEAINVVREMDGNGCRPT 6 IFREM+ NGC PDIVTYGIMVDVLCK GRVDEA+ +V EMD C+PT Sbjct: 181 IFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPT 228 Score = 72.4 bits (176), Expect = 1e-10 Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 2/158 (1%) Frame = -2 Query: 524 VISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVL-NVETFCVIMRKYARAQRVDEAIYTFN 348 V Y+ +IG+ K + K ++ V++ M KGV N TF +I+ DEA F Sbjct: 264 VAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFL 323 Query: 347 VMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMK-DRFVPDSKTYSILLEGWGKSP 171 M K + + + ++ FC+ ++KA +++ MK RF+P T+ +L+ G + Sbjct: 324 RMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKG 382 Query: 170 NLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVD 57 ++ +A + EMI G P VT+G + +L K GR D Sbjct: 383 DVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGRED 420 Score = 68.6 bits (166), Expect = 2e-09 Identities = 57/271 (21%), Positives = 115/271 (42%), Gaps = 51/271 (18%) Frame = -2 Query: 665 LESILNESGIRVSTELVEEILRKFENAGMQSYRFFEWVGKQRNYTHSVISYHTII--GSL 492 L ++ +R + E+ + I +F E GK N + + ++ G Sbjct: 132 LSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCR 191 Query: 491 AKIRQYKLMWDVVSSM----RSKGVLNV--ETFC--------VIMRKYARAQRVDEAIYT 354 I Y +M DV+ + G++N T C V++ Y R+++A+ T Sbjct: 192 PDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVST 251 Query: 353 FNVMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFV---------------- 222 F ME G++ ++A +N+L+ AFCK+ ++ + + M + V Sbjct: 252 FLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIG 311 Query: 221 -------------------PDSKTYSILLEGWGKSPNLPKAREIFREMIGNGCDPDIVTY 99 PD+ TY+++++ + + L KA ++++ M P + T+ Sbjct: 312 RGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTF 371 Query: 98 GIMVDVLCKTGRVDEAINVVREMDGNGCRPT 6 ++++ LC+ G V +A ++ EM G RP+ Sbjct: 372 QVLINGLCEKGDVTQACVLLEEMIEKGIRPS 402 >ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Glycine max] Length = 461 Score = 359 bits (921), Expect = 5e-97 Identities = 165/247 (66%), Positives = 209/247 (84%) Frame = -2 Query: 743 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEEILRKFENAGMQSYRF 564 S ++ +A +++ K+MM+ P L L++ LN++G+RVS +LVE +L++FENAGM ++RF Sbjct: 5 SEAMIQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRF 64 Query: 563 FEWVGKQRNYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCVIMRKYAR 384 FEW KQR Y+HS+ +YH +I SLAKIRQY+++WD+VS+MR KG+LNVETFC++MRKYAR Sbjct: 65 FEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYAR 124 Query: 383 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFVPDSKTY 204 A +VDEA+YTFNVM+KY V NLAAFN LLSA CKS NVRKAQEIFD+MK +FVPD K+Y Sbjct: 125 ANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSY 184 Query: 203 SILLEGWGKSPNLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVDEAINVVREMDG 24 SILLEGWGK+PNLP+ARE+FREM+ GCDPD+VTYGIMVDVLCK GRVDEA+ VV+EMD Sbjct: 185 SILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDV 244 Query: 23 NGCRPTS 3 CRPTS Sbjct: 245 GNCRPTS 251 Score = 75.1 bits (183), Expect = 2e-11 Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 2/158 (1%) Frame = -2 Query: 524 VISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVL-NVETFCVIMRKYARAQRVDEAIYTFN 348 V++Y+ +IG+ K+ ++K + V+ M S GV N T VI+ + D A F Sbjct: 286 VVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFC 345 Query: 347 VMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDR-FVPDSKTYSILLEGWGKSP 171 M K + + + ++ FC+ + A +I+ MK + FVP T+S L++G + Sbjct: 346 RMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKD 404 Query: 170 NLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVD 57 N KA + EMI G P +T+G + +L K GR D Sbjct: 405 NAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGRED 442 >ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 439 Score = 357 bits (915), Expect = 3e-96 Identities = 167/229 (72%), Positives = 203/229 (88%) Frame = -2 Query: 689 MMSSPKLSLESILNESGIRVSTELVEEILRKFENAGMQSYRFFEWVGKQRNYTHSVISYH 510 MMSSP ++L + L+++GIRVS E+VE++LR+FENAGM +YRFFEW KQ +YTHSV +YH Sbjct: 1 MMSSPAVTLHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYH 60 Query: 509 TIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCVIMRKYARAQRVDEAIYTFNVMEKYG 330 T+I SLAKIRQY++MWD++++M+ K +LNVETFC+IMRKYARAQ+++EA+YTFNVMEKY Sbjct: 61 TMIESLAKIRQYQIMWDLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYD 120 Query: 329 VQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFVPDSKTYSILLEGWGKSPNLPKARE 150 V NLAAFN L SA CKSKNVRKAQEIFDS KDRFVPDSKTY+ILLEGWGK+PNLPKARE Sbjct: 121 VPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKARE 180 Query: 149 IFREMIGNGCDPDIVTYGIMVDVLCKTGRVDEAINVVREMDGNGCRPTS 3 IFREM+ GC PDIVTYGIMVD+LCK GRVDEA+++V+EMD C+PTS Sbjct: 181 IFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTS 229 Score = 76.6 bits (187), Expect = 7e-12 Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 3/168 (1%) Frame = -2 Query: 524 VISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFC--VIMRKYARAQRVDEAIYTF 351 +++Y ++ L K + D+V M + +F V++ Y R+++A+ TF Sbjct: 194 IVTYGIMVDILCKAGRVDEALDIVKEM-DLTICKPTSFIYSVLIHTYGIENRIEDAVDTF 252 Query: 350 NVMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDR-FVPDSKTYSILLEGWGKS 174 MEK GV+ ++AA+N+L+ AFCK + + + M + P+S+T +I+L Sbjct: 253 LGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIAR 312 Query: 173 PNLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVDEAINVVREM 30 +A +FR MI C+PD TY +M+ + C+ ++ A+ V + M Sbjct: 313 GETDEAFRVFRRMI-KVCEPDADTYTMMIKMFCERNELEMALKVWKYM 359 Score = 71.6 bits (174), Expect = 2e-10 Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 3/170 (1%) Frame = -2 Query: 557 WVGKQRNYTHS-VISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVL-NVETFCVIMRKYAR 384 ++G ++N + V +Y+ +IG+ K+ ++K ++ V++ M KG+ N T +I+ Sbjct: 252 FLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIA 311 Query: 383 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDR-FVPDSKT 207 DEA F M K + + + ++ FC+ + A +++ MK + FVP T Sbjct: 312 RGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHT 370 Query: 206 YSILLEGWGKSPNLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVD 57 +S+L+ G + ++ A + +MI G P VT+G + +L K GR D Sbjct: 371 FSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGRED 420 >gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana] Length = 481 Score = 356 bits (913), Expect = 4e-96 Identities = 165/247 (66%), Positives = 207/247 (83%) Frame = -2 Query: 743 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEEILRKFENAGMQSYRF 564 S++ ++ D K +SK++MSSP+L L+S L++SG+RVS E+VE++L +F NAG+ +YRF Sbjct: 25 SSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRF 84 Query: 563 FEWVGKQRNYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCVIMRKYAR 384 F+W KQR+Y HSV +YH +I S AKIRQYKLMWD++++MR K +LNVETFC++MRKYAR Sbjct: 85 FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYAR 144 Query: 383 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFVPDSKTY 204 AQ+VDEAIY FNVMEKY + NL AFN LLSA CKSKNVRKAQE+F++M+DRF PDSKTY Sbjct: 145 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTY 204 Query: 203 SILLEGWGKSPNLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVDEAINVVREMDG 24 SILLEGWGK PNLPKARE+FREMI GC PDIVTY IMVD+LCK GRVDEA+ +VR MD Sbjct: 205 SILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDP 264 Query: 23 NGCRPTS 3 + C+PT+ Sbjct: 265 SICKPTT 271 Score = 83.2 bits (204), Expect = 7e-14 Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 18/238 (7%) Frame = -2 Query: 665 LESILNESGIRVSTELVEEILRKFENAGMQSYRFFEWVGKQRNYTHS------------- 525 L ++ +R + E+ E + +F E GK+ N + Sbjct: 174 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 233 Query: 524 --VISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFC--VIMRKYARAQRVDEAIY 357 +++Y ++ L K + +V SM + TF V++ Y R++EA+ Sbjct: 234 PDIVTYSIMVDILCKAGRVDEALGIVRSM-DPSICKPTTFIYSVLVHTYGTENRLEEAVD 292 Query: 356 TFNVMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFV-PDSKTYSILLEGWG 180 TF ME+ G++ ++A FNSL+ AFCK+ ++ + MK + V P+SK+ +I+L Sbjct: 293 TFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLI 352 Query: 179 KSPNLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVDEAINVVREMDGNGCRPT 6 + +A ++FR+MI C+PD TY +++ + C+ ++ A V + M G P+ Sbjct: 353 ERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 409 Score = 67.0 bits (162), Expect = 5e-09 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 2/158 (1%) Frame = -2 Query: 524 VISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFC-VIMRKYARAQRVDEAIYTFN 348 V ++++IG+ K + K ++ V+ M+SKGV C +I+R DEA F Sbjct: 306 VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR 365 Query: 347 VMEKYGVQQNLAAFNSLLSAFCKSKNVRKAQEIFDSMKDRFV-PDSKTYSILLEGWGKSP 171 M K + + + ++ FC+ K + A +++ M+ + V P T+S+L+ G + Sbjct: 366 KMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER 424 Query: 170 NLPKAREIFREMIGNGCDPDIVTYGIMVDVLCKTGRVD 57 KA + EMI G P VT+G + +L K R D Sbjct: 425 TTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED 462