BLASTX nr result

ID: Coptis25_contig00041250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041250
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267...   143   3e-32
ref|XP_002273348.1| PREDICTED: L-type lectin-domain containing r...   136   3e-30
emb|CAN73337.1| hypothetical protein VITISV_042399 [Vitis vinifera]   134   1e-29
ref|XP_002526657.1| kinase, putative [Ricinus communis] gi|22353...   129   3e-28
ref|XP_002273240.1| PREDICTED: L-type lectin-domain containing r...   128   7e-28

>ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera]
          Length = 1435

 Score =  143 bits (360), Expect = 3e-32
 Identities = 79/177 (44%), Positives = 99/177 (55%), Gaps = 5/177 (2%)
 Frame = -2

Query: 619  GDNPRTTHVVGTLGYIAPELVRIGKATASSDVFAYGALLLVVACGKGPIDPV----LGHL 452
            G N  TT VVGT+GYIAPEL R GKA+ SSDVFAYG LLL VACGK PI P       H 
Sbjct: 1259 GKNSHTTSVVGTIGYIAPELTRTGKASTSSDVFAYGVLLLEVACGKRPIRPADSQSSDHF 1318

Query: 451  TLLDWVSECYRSDQIMDVVDPKLNSSYVIEEXXXXXXXXXLCCHPKSDSRPSMRQVMRY- 275
             L+DWV ECY++ QI+D VDP++NS YV+EE          C HP+ ++RP+MRQV RY 
Sbjct: 1319 ILMDWVFECYQAGQILDAVDPRMNSVYVVEEVELVLRLGLFCSHPRPEARPTMRQVTRYL 1378

Query: 274  XXXXXXXXXXXXXXXAYLHLDSVKSIYRGMDPKNESTQLSQDSSYGRISTNSLEAGR 104
                                  +   +  +   +  T   + SS G IS+ S+ AGR
Sbjct: 1379 SRDDPLPIVDDWAAPDSSRFSDISPRFLQIVSTDTITSSCRSSSVGYISSGSIRAGR 1435


>ref|XP_002273348.1| PREDICTED: L-type lectin-domain containing receptor kinase V.9-like
            [Vitis vinifera]
          Length = 695

 Score =  136 bits (342), Expect = 3e-30
 Identities = 78/175 (44%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
 Frame = -2

Query: 619  GDNPRTTHVVGTLGYIAPELVRIGKATASSDVFAYGALLLVVACGKGPIDPVLG---HLT 449
            G NP TTHVVGT+GYIAPEL   GKATASSDVFA+GA+LL VACG+ P+DP       + 
Sbjct: 533  GKNPSTTHVVGTVGYIAPELSLTGKATASSDVFAFGAVLLEVACGRRPLDPNASSGKQMI 592

Query: 448  LLDWVSECYRSDQIMDVVDPKLNSSYVIEEXXXXXXXXXLCCHPKSDSRPSMRQVMRYXX 269
            L DWV++C++   I++  DPKL +SYV EE         LC HP+  +RP+M+QV RY  
Sbjct: 593  LQDWVTQCHQRGHILEAADPKLGNSYVKEEIELVLKVGLLCSHPEPQARPNMQQVTRYLS 652

Query: 268  XXXXXXXXXXXXXAYLHLDSVKSIYRGMDPKNESTQLSQDSSYGRISTNSLEAGR 104
                           +   S+      +D K +    S  SSYG +S  SL +GR
Sbjct: 653  GFDPLPE--------VDASSLGFFVGSLDSKTD----SHPSSYGVMSVGSLASGR 695


>emb|CAN73337.1| hypothetical protein VITISV_042399 [Vitis vinifera]
          Length = 673

 Score =  134 bits (337), Expect = 1e-29
 Identities = 78/175 (44%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
 Frame = -2

Query: 619 GDNPRTTHVVGTLGYIAPELVRIGKATASSDVFAYGALLLVVACGKGPIDPVLG---HLT 449
           G NP TTHVVGT+GYIAPEL   GKATASSDVFA+GA+LL VACG+ P+DP       + 
Sbjct: 511 GKNPXTTHVVGTVGYIAPELSLTGKATASSDVFAFGAVLLEVACGRRPLDPNASSGKQMI 570

Query: 448 LLDWVSECYRSDQIMDVVDPKLNSSYVIEEXXXXXXXXXLCCHPKSDSRPSMRQVMRYXX 269
           L DWV++C++    ++  DPKL +SYV EE         LC HP+  +RP+M+QV RY  
Sbjct: 571 LQDWVAQCHQRGHXLEAADPKLGNSYVKEEIELVLKXGLLCSHPEPQARPNMQQVTRYLS 630

Query: 268 XXXXXXXXXXXXXAYLHLDSVKSIYRGMDPKNESTQLSQDSSYGRISTNSLEAGR 104
                          +   S+      +D K +    S  SSYG +S  SL +GR
Sbjct: 631 GFDPLPE--------VDASSLGFFVGSLDSKTD----SHPSSYGVMSVGSLASGR 673


>ref|XP_002526657.1| kinase, putative [Ricinus communis] gi|223533957|gb|EEF35679.1|
            kinase, putative [Ricinus communis]
          Length = 675

 Score =  129 bits (325), Expect = 3e-28
 Identities = 78/173 (45%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = -2

Query: 619  GDNPRTTHVVGTLGYIAPELVRIGKATASSDVFAYGALLLVVACGKGPIDPVLGHLTLLD 440
            G N  TT VVGT+GYIAPEL R GKA+ SSDVFAYG LLL VA G+ PI    G   L+D
Sbjct: 505  GINSHTTSVVGTIGYIAPELARTGKASTSSDVFAYGVLLLEVATGRRPIGS--GQFILVD 562

Query: 439  WVSECYRSDQIMDVVDPKLNSSYVIEEXXXXXXXXXLCCHPKSDSRPSMRQVMRYXXXXX 260
            WV EC +  +I+D VDP LNS+Y  EE         LC H  SDSRPSMRQV  Y     
Sbjct: 563  WVLECQQVGKILDAVDPNLNSNYTAEEVELVLELGLLCAHQNSDSRPSMRQVTTYLNGDY 622

Query: 259  XXXXXXXXXXAYL-HLDSVKSIYRGMDPKNESTQLSQDSSYGRISTNSLEAGR 104
                          HL  + S    +     ++   + SS   +ST+S++AGR
Sbjct: 623  KLPVIEDWGSYESHHLSEINSRLLKLSNCEMTSTSYRSSSIRYMSTSSIDAGR 675


>ref|XP_002273240.1| PREDICTED: L-type lectin-domain containing receptor kinase V.9-like
            [Vitis vinifera]
          Length = 718

 Score =  128 bits (322), Expect = 7e-28
 Identities = 76/175 (43%), Positives = 99/175 (56%), Gaps = 3/175 (1%)
 Frame = -2

Query: 619  GDNPRTTHVVGTLGYIAPELVRIGKATASSDVFAYGALLLVVACGKGPIDPVLG---HLT 449
            G NPRTTHVVGT+GYIAPEL   GKATASSDVFA+GA+LL VACG+ P+DP       + 
Sbjct: 556  GKNPRTTHVVGTVGYIAPELSLTGKATASSDVFAFGAVLLEVACGRRPLDPNASSGKQMI 615

Query: 448  LLDWVSECYRSDQIMDVVDPKLNSSYVIEEXXXXXXXXXLCCHPKSDSRPSMRQVMRYXX 269
            L DWV++C++   I++  + KL +SYV EE         LC  P+  +RP+M+QV RY  
Sbjct: 616  LQDWVAQCHQRGHILEAANRKLGNSYVKEEIELVLKVGLLCSDPEPQARPNMQQVTRYLS 675

Query: 268  XXXXXXXXXXXXXAYLHLDSVKSIYRGMDPKNESTQLSQDSSYGRISTNSLEAGR 104
                           +   S+      +D K +    S  SSYG +S  SL  GR
Sbjct: 676  GFDPLPE--------VDASSLGFFVGSLDSKAD----SHPSSYGVMSAGSLATGR 718


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