BLASTX nr result

ID: Coptis25_contig00041248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041248
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273407.1| PREDICTED: ankyrin-3-like [Vitis vinifera]         86   3e-15
ref|XP_002316195.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
emb|CAN73340.1| hypothetical protein VITISV_042402 [Vitis vinifera]    85   5e-15
ref|XP_003519425.1| PREDICTED: ankyrin repeat, PH and SEC7 domai...    82   5e-14
ref|XP_003628372.1| Ankyrin repeat domain-containing protein [Me...    81   1e-13

>ref|XP_002273407.1| PREDICTED: ankyrin-3-like [Vitis vinifera]
          Length = 470

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
 Frame = -1

Query: 275 PPLSYATFQIILKPQTQLXXXXXXXXXXXFLIKTA---EFR-ESTQSEYINSWFNSQPHL 108
           PPLS A FQ+ILKPQ+Q            FLIKTA   EF  +STQ + INSWF S+P  
Sbjct: 61  PPLSSAAFQVILKPQSQPPAMFPRSPTDRFLIKTALAAEFSTQSTQPDSINSWFASRP-- 118

Query: 107 VTFDVKLKVAYVGVFLFRHAIHASDVEAVKNIVKR 3
            T D+KLKV +VG FL RHA+ A DV+A +N++KR
Sbjct: 119 -TQDLKLKVVFVGPFLLRHAVAAGDVDAARNLIKR 152


>ref|XP_002316195.1| predicted protein [Populus trichocarpa] gi|222865235|gb|EEF02366.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
 Frame = -1

Query: 272 PLSYATFQIILKPQTQLXXXXXXXXXXXFLIKTAEFRE----STQSEYINSWFNSQPHLV 105
           PLS+ATFQI+L+PQ QL           FLIKTA F      ST  + + SWF+S P   
Sbjct: 60  PLSFATFQIVLRPQNQLPPTFPRSPSDRFLIKTAPFASNSPCSTHPDSLASWFSSLPLDS 119

Query: 104 TFDVKLKVAYVGVFLFRHAIHASDVEAVKNIVKR 3
           T D KLKVA+VG FL RHA+   D ++VKNI+KR
Sbjct: 120 TQDFKLKVAFVGPFLLRHAVSCGDADSVKNILKR 153


>emb|CAN73340.1| hypothetical protein VITISV_042402 [Vitis vinifera]
          Length = 989

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
 Frame = -1

Query: 275 PPLSYATFQIILKPQTQLXXXXXXXXXXXFLIKTAEFRE----STQSEYINSWFNSQPHL 108
           PPLS A FQ+ILKPQ+Q            FLIKTA   E    STQ + INSWF S+P  
Sbjct: 61  PPLSSAAFQVILKPQSQPPAMFPRSPTDRFLIKTALAXEFSTXSTQPDSINSWFASRP-- 118

Query: 107 VTFDVKLKVAYVGVFLFRHAIHASDVEAVKNIVKR 3
            T D+KLKV +VG FL RHA+ A DV+A +N++KR
Sbjct: 119 -TQDLKLKVVFVGPFLLRHAVAAGDVDAARNLIKR 152


>ref|XP_003519425.1| PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein
           secG-like [Glycine max]
          Length = 351

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
 Frame = -1

Query: 272 PLSYATFQIILKPQTQLXXXXXXXXXXXFLIKTAEFRE----STQSEYINSWFNSQPH-L 108
           PLS ATFQ+ILKPQ+ L           FL+KTAEF      ST  E INSWF S+P+  
Sbjct: 61  PLSSATFQVILKPQSHLPHSYPRSPSDRFLVKTAEFCANSSCSTHPESINSWFASRPYGF 120

Query: 107 VTFDVKLKVAYVGVFLFRHAIHASDVEAVKNIVKR 3
            T D+KLKVA+VG  L   A+   D++AV+N++KR
Sbjct: 121 KTLDIKLKVAFVGPILLNDAVTRGDLDAVRNLIKR 155


>ref|XP_003628372.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
           gi|355522394|gb|AET02848.1| Ankyrin repeat
           domain-containing protein [Medicago truncatula]
          Length = 361

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = -1

Query: 275 PPLSYATFQIILKPQTQLXXXXXXXXXXXFLIKTAEFR-ESTQSEYINSWFNSQPH-LVT 102
           PPLS +TFQ+ILKPQ+ L           FLIKTAEF   S+ ++ IN+WF S  + L T
Sbjct: 62  PPLSMSTFQVILKPQSHLPPSYPRSPKDRFLIKTAEFTANSSDNDSINAWFASCSYGLST 121

Query: 101 FDVKLKVAYVGVFLFRHAIHASDVEAVKNIVKR 3
           +D+KLKVA+VG FL   A+   D+E V++++KR
Sbjct: 122 YDIKLKVAFVGSFLLCDAVSRGDLECVRSLIKR 154


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