BLASTX nr result

ID: Coptis25_contig00041234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041234
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31915.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    75   4e-12
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]    75   4e-12
ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]    74   9e-12

>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/78 (43%), Positives = 53/78 (67%)
 Frame = +3

Query: 3   CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182
           C  MG FMP +G  +  E  +++ AL ILV+T++V++CIQ+ TGVI+ +  EH ++M  M
Sbjct: 100 CTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIM 159

Query: 183 LVLLFLMWFSAVVINRQK 236
           LVLL ++ FSA+ +   K
Sbjct: 160 LVLLLILSFSALTVPTTK 177


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/78 (43%), Positives = 53/78 (67%)
 Frame = +3

Query: 3   CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182
           C  MG FMP +G  +  E  +++ AL ILV+T++V++CIQ+ TGVI+ +  EH ++M  M
Sbjct: 100 CTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIM 159

Query: 183 LVLLFLMWFSAVVINRQK 236
           LVLL ++ FSA+ +   K
Sbjct: 160 LVLLLILSFSALTVPTTK 177


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/78 (43%), Positives = 53/78 (67%)
 Frame = +3

Query: 3   CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182
           C  MG FMP +G  +  E  +++ AL ILV+T++V++CIQ+ TGVI+ +  EH ++M  M
Sbjct: 100 CTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIM 159

Query: 183 LVLLFLMWFSAVVINRQK 236
           LVLL ++ FSA+ +   K
Sbjct: 160 LVLLLILSFSALTVPTTK 177


>ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|222840939|gb|EEE78486.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/74 (50%), Positives = 51/74 (68%)
 Frame = +3

Query: 3   CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182
           C  MG  MP LGA   S+  T+M AL ILV+TV+V+I IQ+ TGVI+ +  EH+ IM  M
Sbjct: 100 CTVMGNSMPSLGAMDNSDLCTNMIALGILVITVIVNIGIQLGTGVIYLYWKEHVFIMFLM 159

Query: 183 LVLLFLMWFSAVVI 224
           L+LL ++ FSA+ +
Sbjct: 160 LILLLILSFSALTV 173


>emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]
          Length = 287

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/78 (42%), Positives = 53/78 (67%)
 Frame = +3

Query: 3   CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182
           C  MG FMP +G  +  E  +++ AL IL++T++V++CI++ TGVI+ F  EH ++M  M
Sbjct: 132 CTVMGNFMPSIGTTENKEVFSNVIALDILMITLMVNVCIKMGTGVIYVFWKEHAVLMFIM 191

Query: 183 LVLLFLMWFSAVVINRQK 236
           LVLL ++ FSA+ +   K
Sbjct: 192 LVLLLILSFSALTVPTTK 209


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