BLASTX nr result
ID: Coptis25_contig00041234
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041234 (244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31915.3| unnamed protein product [Vitis vinifera] 75 4e-12 ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262... 75 4e-12 emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera] 75 4e-12 ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera] 74 9e-12 >emb|CBI31915.3| unnamed protein product [Vitis vinifera] Length = 695 Score = 75.5 bits (184), Expect = 4e-12 Identities = 34/78 (43%), Positives = 53/78 (67%) Frame = +3 Query: 3 CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182 C MG FMP +G + E +++ AL ILV+T++V++CIQ+ TGVI+ + EH ++M M Sbjct: 100 CTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIM 159 Query: 183 LVLLFLMWFSAVVINRQK 236 LVLL ++ FSA+ + K Sbjct: 160 LVLLLILSFSALTVPTTK 177 >ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera] Length = 754 Score = 75.5 bits (184), Expect = 4e-12 Identities = 34/78 (43%), Positives = 53/78 (67%) Frame = +3 Query: 3 CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182 C MG FMP +G + E +++ AL ILV+T++V++CIQ+ TGVI+ + EH ++M M Sbjct: 100 CTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIM 159 Query: 183 LVLLFLMWFSAVVINRQK 236 LVLL ++ FSA+ + K Sbjct: 160 LVLLLILSFSALTVPTTK 177 >emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera] Length = 754 Score = 75.5 bits (184), Expect = 4e-12 Identities = 34/78 (43%), Positives = 53/78 (67%) Frame = +3 Query: 3 CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182 C MG FMP +G + E +++ AL ILV+T++V++CIQ+ TGVI+ + EH ++M M Sbjct: 100 CTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIM 159 Query: 183 LVLLFLMWFSAVVINRQK 236 LVLL ++ FSA+ + K Sbjct: 160 LVLLLILSFSALTVPTTK 177 >ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|222840939|gb|EEE78486.1| predicted protein [Populus trichocarpa] Length = 753 Score = 74.7 bits (182), Expect = 7e-12 Identities = 37/74 (50%), Positives = 51/74 (68%) Frame = +3 Query: 3 CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182 C MG MP LGA S+ T+M AL ILV+TV+V+I IQ+ TGVI+ + EH+ IM M Sbjct: 100 CTVMGNSMPSLGAMDNSDLCTNMIALGILVITVIVNIGIQLGTGVIYLYWKEHVFIMFLM 159 Query: 183 LVLLFLMWFSAVVI 224 L+LL ++ FSA+ + Sbjct: 160 LILLLILSFSALTV 173 >emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera] Length = 287 Score = 74.3 bits (181), Expect = 9e-12 Identities = 33/78 (42%), Positives = 53/78 (67%) Frame = +3 Query: 3 CISMGFFMPPLGANQKSECLTSMAALSILVVTVVVDICIQINTGVIFTFRTEHIIIMSCM 182 C MG FMP +G + E +++ AL IL++T++V++CI++ TGVI+ F EH ++M M Sbjct: 132 CTVMGNFMPSIGTTENKEVFSNVIALDILMITLMVNVCIKMGTGVIYVFWKEHAVLMFIM 191 Query: 183 LVLLFLMWFSAVVINRQK 236 LVLL ++ FSA+ + K Sbjct: 192 LVLLLILSFSALTVPTTK 209