BLASTX nr result

ID: Coptis25_contig00041214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041214
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-...   197   7e-49
ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-...   191   9e-47
emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]   189   2e-46
ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-...   150   2e-34
ref|NP_001238437.1| uncharacterized protein LOC100527339 [Glycin...   140   1e-31

>ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
          Length = 210

 Score =  197 bits (502), Expect = 7e-49
 Identities = 94/128 (73%), Positives = 105/128 (82%)
 Frame = +1

Query: 1   QLCIDDKCLILQLFYMDEIPNLLKDFLGDSKFKFVGIEVGDDVQKLRNEYGLICSSHLDI 180
           QLCIDDKCLILQLFYMDEIP  LK FL DS F FVGIEVGDD+ KL+NEYGL CS   DI
Sbjct: 80  QLCIDDKCLILQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKLKNEYGLDCSRSADI 139

Query: 181 RELAKTRYPGRFRRPGLKDLALEISGLRMMKPEHVCLSNWESRILDVNQIEYACIDAYAS 360
           R+LA  R+PGRFRRPGLKDLA E++ L M KP+HV +SNWE+R+L  NQIEYACIDAYAS
Sbjct: 140 RDLAMQRWPGRFRRPGLKDLAWEVTNLPMKKPKHVSMSNWEARVLSENQIEYACIDAYAS 199

Query: 361 YKIAQDLL 384
           YKI   L+
Sbjct: 200 YKIGHKLI 207


>ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
          Length = 208

 Score =  191 bits (484), Expect = 9e-47
 Identities = 89/128 (69%), Positives = 105/128 (82%)
 Frame = +1

Query: 1   QLCIDDKCLILQLFYMDEIPNLLKDFLGDSKFKFVGIEVGDDVQKLRNEYGLICSSHLDI 180
           QLCI++KCLILQLFYMDEIP  LK FL DS F FVG+EVG D+ KL+NEYGL CS   D+
Sbjct: 77  QLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKLKNEYGLECSCSADV 136

Query: 181 RELAKTRYPGRFRRPGLKDLALEISGLRMMKPEHVCLSNWESRILDVNQIEYACIDAYAS 360
           R LA  R+PGRFRRPGLKDLA E+  LRM KP+HVC+SNWE+R+L+ NQ+EYACIDAYAS
Sbjct: 137 RILAMQRWPGRFRRPGLKDLAWEVVNLRMKKPKHVCMSNWEARVLNENQVEYACIDAYAS 196

Query: 361 YKIAQDLL 384
           Y+I   L+
Sbjct: 197 YRIGHKLI 204


>emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]
          Length = 219

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/128 (68%), Positives = 105/128 (82%)
 Frame = +1

Query: 1   QLCIDDKCLILQLFYMDEIPNLLKDFLGDSKFKFVGIEVGDDVQKLRNEYGLICSSHLDI 180
           QLCI++KCLILQLFYMDEIP  LK FL DS F FVG+EVG D+ KL+NEYGL CS   D+
Sbjct: 88  QLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKLKNEYGLECSCSADV 147

Query: 181 RELAKTRYPGRFRRPGLKDLALEISGLRMMKPEHVCLSNWESRILDVNQIEYACIDAYAS 360
           R LA  R+PGRFRRPGLKDLA E+  LRM KP+HVC+SNWE+R+L+ NQ++YACIDAYAS
Sbjct: 148 RILAMQRWPGRFRRPGLKDLAWEVVNLRMKKPKHVCMSNWEARVLNENQVDYACIDAYAS 207

Query: 361 YKIAQDLL 384
           Y+I   L+
Sbjct: 208 YRIGHKLI 215


>ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
          Length = 196

 Score =  150 bits (378), Expect = 2e-34
 Identities = 77/129 (59%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   QLCIDDKCLILQLFYMDEIPNLLKDFLGDSKFKFVGIEVGDDVQKLRNEYGLICSSHLDI 180
           QLC+D KCLILQLFY D IP   K+FL +    FVG+EV  D  KLR+EY L C    +I
Sbjct: 65  QLCVDTKCLILQLFYTDYIPQSFKNFLSNPAVTFVGVEVESDAMKLRDEYELDCQETSNI 124

Query: 181 RELAKTRYPGR-FRRPGLKDLALEISGLRMMKPEHVCLSNWESRILDVNQIEYACIDAYA 357
           R LA + +P R +RRPGLKDLA +I GL M KP HVC SNWE+RIL   Q+EYA IDAYA
Sbjct: 125 RALACSFWPNRWYRRPGLKDLAFQIVGLLMQKPIHVCSSNWEARILSNEQVEYASIDAYA 184

Query: 358 SYKIAQDLL 384
           SY+I   LL
Sbjct: 185 SYRIGHRLL 193


>ref|NP_001238437.1| uncharacterized protein LOC100527339 [Glycine max]
           gi|255632121|gb|ACU16413.1| unknown [Glycine max]
          Length = 208

 Score =  140 bits (354), Expect = 1e-31
 Identities = 68/131 (51%), Positives = 95/131 (72%)
 Frame = +1

Query: 1   QLCIDDKCLILQLFYMDEIPNLLKDFLGDSKFKFVGIEVGDDVQKLRNEYGLICSSHLDI 180
           QLCI++KCLI+QLF+MD IP  L+ FL DS F+FVG+ V +D++ L+N+YGL C+  +D+
Sbjct: 78  QLCIENKCLIIQLFHMDNIPQSLRSFLMDSNFEFVGVGVINDLRMLKNDYGLECNKGIDV 137

Query: 181 RELAKTRYPGRFRRPGLKDLALEISGLRMMKPEHVCLSNWESRILDVNQIEYACIDAYAS 360
             LAK ++P R     LK LA E+ GL M K + VC S W+S+ L   QIEYACIDAYAS
Sbjct: 138 SLLAKEKWPHRISSGALKYLAKELVGLEMEKSKAVCTSEWQSKELTQTQIEYACIDAYAS 197

Query: 361 YKIAQDLLSRN 393
           +KI + +L+++
Sbjct: 198 FKIGKMILNQD 208


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