BLASTX nr result

ID: Coptis25_contig00041209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041209
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW66749.1| putative leucine-rich repeat receptor-like protei...    72   5e-11
ref|XP_002533428.1| serine-threonine protein kinase, plant-type,...    71   8e-11
ref|NP_001042048.1| Os01g0152800 [Oryza sativa Japonica Group] g...    70   2e-10
ref|XP_003623235.1| Receptor kinase-like protein [Medicago trunc...    70   2e-10
ref|XP_002451570.1| hypothetical protein SORBIDRAFT_04g004040 [S...    70   2e-10

>gb|AFW66749.1| putative leucine-rich repeat receptor-like protein kinase family
           protein [Zea mays]
          Length = 1060

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/85 (41%), Positives = 52/85 (61%)
 Frame = -2

Query: 256 EFITSITNCSNLEVIDIGDNYFGGRLPDSISNLSTTVKVLSLYNNNIFGSFPVGIDSXXX 77
           EF+ S+ NCS+L+V+ + DNYF G+LP +++NLSTT++ L L+NN+I GS P GI +   
Sbjct: 337 EFVASLANCSSLQVLTLSDNYFSGQLPRAVANLSTTLQQLYLHNNSISGSIPEGIGNLVG 396

Query: 76  XXXXXXXXXXXXXXIPAVIGKLNKL 2
                         IP  +G+L  L
Sbjct: 397 LDLLSLGINPISGVIPESLGRLTNL 421


>ref|XP_002533428.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526716|gb|EEF28948.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 963

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/87 (44%), Positives = 50/87 (57%)
 Frame = -2

Query: 262 DLEFITSITNCSNLEVIDIGDNYFGGRLPDSISNLSTTVKVLSLYNNNIFGSFPVGIDSX 83
           DL F+ S+TN + LE + +  N FGG LPDSI+NLSTT+++L L NN I GS P GI++ 
Sbjct: 340 DLSFLHSLTNTTALEELGVNGNNFGGMLPDSIANLSTTLRILLLDNNRIIGSIPSGIENL 399

Query: 82  XXXXXXXXXXXXXXXXIPAVIGKLNKL 2
                           IP  IGKL  L
Sbjct: 400 VSLEDFEVWNNQLSGFIPDSIGKLQNL 426


>ref|NP_001042048.1| Os01g0152800 [Oryza sativa Japonica Group]
           gi|54290229|dbj|BAD61117.1| putative protein kinase Xa21
           [Oryza sativa Japonica Group]
           gi|54290452|dbj|BAD61339.1| putative protein kinase Xa21
           [Oryza sativa Japonica Group]
           gi|113531579|dbj|BAF03962.1| Os01g0152800 [Oryza sativa
           Japonica Group] gi|215734977|dbj|BAG95699.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1051

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/85 (47%), Positives = 50/85 (58%)
 Frame = -2

Query: 256 EFITSITNCSNLEVIDIGDNYFGGRLPDSISNLSTTVKVLSLYNNNIFGSFPVGIDSXXX 77
           EFITS+TNCS L+ + I DN F G+LP+S+ NLSTT+  L L NN+I GS P  I +   
Sbjct: 339 EFITSLTNCSQLQQLVISDNSFSGQLPNSVVNLSTTLHKLYLDNNSISGSIPEDIGNLIG 398

Query: 76  XXXXXXXXXXXXXXIPAVIGKLNKL 2
                         IPA IGKL+ L
Sbjct: 399 LDTLDLGFTSLSGVIPASIGKLSNL 423


>ref|XP_003623235.1| Receptor kinase-like protein [Medicago truncatula]
           gi|355498250|gb|AES79453.1| Receptor kinase-like protein
           [Medicago truncatula]
          Length = 1003

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/87 (40%), Positives = 48/87 (55%)
 Frame = -2

Query: 262 DLEFITSITNCSNLEVIDIGDNYFGGRLPDSISNLSTTVKVLSLYNNNIFGSFPVGIDSX 83
           +L F+TS+ NC+ LEV+ + +N FGG+LP SI NLS  +  L L  N I+GS P+GI + 
Sbjct: 320 ELNFLTSLINCTALEVLGLAENQFGGKLPSSIGNLSINLNALDLGENAIYGSIPIGISNL 379

Query: 82  XXXXXXXXXXXXXXXXIPAVIGKLNKL 2
                           +P  IG L KL
Sbjct: 380 VNLTSLGMEKNNLSGFVPDTIGMLQKL 406


>ref|XP_002451570.1| hypothetical protein SORBIDRAFT_04g004040 [Sorghum bicolor]
           gi|241931401|gb|EES04546.1| hypothetical protein
           SORBIDRAFT_04g004040 [Sorghum bicolor]
          Length = 1157

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/87 (43%), Positives = 49/87 (56%)
 Frame = -2

Query: 262 DLEFITSITNCSNLEVIDIGDNYFGGRLPDSISNLSTTVKVLSLYNNNIFGSFPVGIDSX 83
           D  F+ S+TNCSNL V+D+  N   G LP+SI NLST ++ L++ NNNI G+   GI + 
Sbjct: 473 DWSFVASLTNCSNLVVLDVNSNNLHGMLPNSIGNLSTQLEFLNIGNNNITGTITEGIGNL 532

Query: 82  XXXXXXXXXXXXXXXXIPAVIGKLNKL 2
                           IPA IG LNKL
Sbjct: 533 VNLQTLSMPQNFLIGAIPASIGNLNKL 559


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