BLASTX nr result
ID: Coptis25_contig00041203
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041203 (207 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN82280.1| hypothetical protein VITISV_044064 [Vitis vinifera] 54 4e-11 emb|CBI15549.3| unnamed protein product [Vitis vinifera] 54 1e-10 ref|XP_003634199.1| PREDICTED: uncharacterized GPI-anchored prot... 54 1e-10 ref|XP_002317884.1| predicted protein [Populus trichocarpa] gi|2... 47 2e-07 ref|XP_002533130.1| conserved hypothetical protein [Ricinus comm... 45 3e-07 >emb|CAN82280.1| hypothetical protein VITISV_044064 [Vitis vinifera] Length = 328 Score = 54.3 bits (129), Expect(2) = 4e-11 Identities = 23/33 (69%), Positives = 29/33 (87%) Frame = +3 Query: 39 GKNRAGQLSRSKSCPVLAAWLYSAYAGTALGQS 137 GK +G+L RS+ CPVLAAWLYSAY+GTALG++ Sbjct: 73 GKGASGELRRSRCCPVLAAWLYSAYSGTALGRA 105 Score = 38.1 bits (87), Expect(2) = 4e-11 Identities = 14/18 (77%), Positives = 18/18 (100%) Frame = +1 Query: 154 TPYDLPILPEDSESCVDN 207 TPYDLP+LP+DSE+CVD+ Sbjct: 114 TPYDLPLLPDDSETCVDD 131 >emb|CBI15549.3| unnamed protein product [Vitis vinifera] Length = 374 Score = 54.3 bits (129), Expect(2) = 1e-10 Identities = 23/33 (69%), Positives = 29/33 (87%) Frame = +3 Query: 39 GKNRAGQLSRSKSCPVLAAWLYSAYAGTALGQS 137 GK +G+L RS+ CPVLAAWLYSAY+GTALG++ Sbjct: 72 GKGASGELRRSRCCPVLAAWLYSAYSGTALGRA 104 Score = 36.2 bits (82), Expect(2) = 1e-10 Identities = 13/18 (72%), Positives = 18/18 (100%) Frame = +1 Query: 154 TPYDLPILPEDSESCVDN 207 TPYDLP+LP+DSE+CV++ Sbjct: 113 TPYDLPLLPDDSETCVND 130 >ref|XP_003634199.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Vitis vinifera] Length = 327 Score = 54.3 bits (129), Expect(2) = 1e-10 Identities = 23/33 (69%), Positives = 29/33 (87%) Frame = +3 Query: 39 GKNRAGQLSRSKSCPVLAAWLYSAYAGTALGQS 137 GK +G+L RS+ CPVLAAWLYSAY+GTALG++ Sbjct: 72 GKGASGELRRSRCCPVLAAWLYSAYSGTALGRA 104 Score = 36.2 bits (82), Expect(2) = 1e-10 Identities = 13/18 (72%), Positives = 18/18 (100%) Frame = +1 Query: 154 TPYDLPILPEDSESCVDN 207 TPYDLP+LP+DSE+CV++ Sbjct: 113 TPYDLPLLPDDSETCVND 130 >ref|XP_002317884.1| predicted protein [Populus trichocarpa] gi|222858557|gb|EEE96104.1| predicted protein [Populus trichocarpa] Length = 294 Score = 47.4 bits (111), Expect(2) = 2e-07 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 11/58 (18%) Frame = +3 Query: 3 NLATCPL-----------A*AMLGKNRAGQLSRSKSCPVLAAWLYSAYAGTALGQSGQ 143 NLA CPL + G + +G L R++ CPVLAAWLYSAY+ TAL ++ + Sbjct: 41 NLAGCPLELPNELFNGIKSACGSGSSASGHLHRTRCCPVLAAWLYSAYSATALSRANK 98 Score = 32.3 bits (72), Expect(2) = 2e-07 Identities = 11/15 (73%), Positives = 15/15 (100%) Frame = +1 Query: 160 YDLPILPEDSESCVD 204 YD+P+LP+DSE+CVD Sbjct: 111 YDMPLLPDDSETCVD 125 >ref|XP_002533130.1| conserved hypothetical protein [Ricinus communis] gi|223527074|gb|EEF29257.1| conserved hypothetical protein [Ricinus communis] Length = 330 Score = 45.1 bits (105), Expect(2) = 3e-07 Identities = 19/33 (57%), Positives = 26/33 (78%) Frame = +3 Query: 45 NRAGQLSRSKSCPVLAAWLYSAYAGTALGQSGQ 143 N QL +S+ CPVLAAWLY+AY+ TALG++ + Sbjct: 75 NGQQQLHKSRCCPVLAAWLYAAYSATALGRAAR 107 Score = 34.3 bits (77), Expect(2) = 3e-07 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 4/30 (13%) Frame = +1 Query: 130 GRAGKMAVTP----YDLPILPEDSESCVDN 207 GRA ++A YD+P+LP+DSE+CVD+ Sbjct: 103 GRAARVAPATVAGAYDMPLLPDDSETCVDD 132