BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041197
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|35550...   100   1e-19
ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|35548...   100   1e-19
ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|...    64   9e-19
ref|YP_636345.1| hypothetical protein EuglglCp070 [Eucalyptus gl...    97   2e-18
ref|XP_002863307.1| predicted protein [Arabidopsis lyrata subsp....    77   2e-12

>ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|355505209|gb|AES86351.1|
           Ycf68 protein [Medicago truncatula]
          Length = 237

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/71 (71%), Positives = 53/71 (74%)
 Frame = -1

Query: 215 RALSHMDSSMCSSAPDPEMWIIQGTLAWRTPPVRTGV*NQTSPQEDRWGDSGEIQCRSNF 36
           RALSH+DSSMCSSAPDPEMWIIQGTL                  EDRWGDSGEIQCRSNF
Sbjct: 119 RALSHIDSSMCSSAPDPEMWIIQGTL------------------EDRWGDSGEIQCRSNF 160

Query: 35  LFTRGIRAVRG 3
           LFTRGIRAV+G
Sbjct: 161 LFTRGIRAVQG 171


>ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|355488624|gb|AES69827.1|
           Ycf68 protein [Medicago truncatula]
          Length = 237

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/71 (71%), Positives = 53/71 (74%)
 Frame = -1

Query: 215 RALSHMDSSMCSSAPDPEMWIIQGTLAWRTPPVRTGV*NQTSPQEDRWGDSGEIQCRSNF 36
           RALSH+DSSMCSSAPDPEMWIIQGTL                  EDRWGDSGEIQCRSNF
Sbjct: 119 RALSHIDSSMCSSAPDPEMWIIQGTL------------------EDRWGDSGEIQCRSNF 160

Query: 35  LFTRGIRAVRG 3
           LFTRGIRAV+G
Sbjct: 161 LFTRGIRAVQG 171


>ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|AES92424.1| Ycf68
           [Medicago truncatula]
          Length = 501

 Score = 63.9 bits (154), Expect(2) = 9e-19
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -1

Query: 218 VRALSHMDSSMCSSAPDPEMWIIQGTLAWR 129
           V ALSH+DSSMCSSAPDPEMWIIQGTLAWR
Sbjct: 407 VEALSHIDSSMCSSAPDPEMWIIQGTLAWR 436



 Score = 54.3 bits (129), Expect(2) = 9e-19
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -2

Query: 82  RIDGAIQVRSNVDPTFYSLVGSGRSGG 2
           RIDGAIQVRSNVDPTFYSLVGSGRS G
Sbjct: 436 RIDGAIQVRSNVDPTFYSLVGSGRSRG 462


>ref|YP_636345.1| hypothetical protein EuglglCp070 [Eucalyptus globulus subsp.
           globulus] gi|108802701|ref|YP_636358.1| hypothetical
           protein EuglglCp084 [Eucalyptus globulus subsp.
           globulus] gi|122219157|sp|Q49KT9.1|YCF68_EUCGG RecName:
           Full=Uncharacterized protein ycf68; AltName: Full=ORF113
           gi|60460854|gb|AAX21074.1| hypothetical protein
           [Eucalyptus globulus subsp. globulus]
           gi|60460867|gb|AAX21087.1| hypothetical protein
           [Eucalyptus globulus subsp. globulus]
          Length = 113

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/67 (74%), Positives = 52/67 (77%)
 Frame = -1

Query: 239 LRHCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTPPVRTGV*NQTSPQEDRWGDSG 60
           +R CAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRT PVRTG   +T P   R    G
Sbjct: 1   MRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGF--ETKPLLRR--IDG 56

Query: 59  EIQCRSN 39
            IQ RSN
Sbjct: 57  AIQVRSN 63



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/35 (97%), Positives = 34/35 (97%)
 Frame = -2

Query: 106 FETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGG 2
           FETK LLRRIDGAIQVRSNVDPTFYSLVGSGRSGG
Sbjct: 45  FETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGG 79


>ref|XP_002863307.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309141|gb|EFH39566.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 90

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/35 (94%), Positives = 35/35 (100%)
 Frame = -1

Query: 209 LSHMDSSMCSSAPDPEMWIIQGTLAWRTPPVRTGV 105
           ++HMDSSMCSSAPDPEMWIIQGTLAWRTPPVRTGV
Sbjct: 56  VNHMDSSMCSSAPDPEMWIIQGTLAWRTPPVRTGV 90