BLASTX nr result

ID: Coptis25_contig00041189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041189
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...   164   7e-39
emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]   163   2e-38
ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   161   4e-38
ref|XP_002513722.1| Spotted leaf protein, putative [Ricinus comm...   161   6e-38
ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/148 (53%), Positives = 104/148 (70%), Gaps = 3/148 (2%)
 Frame = +2

Query: 2   QPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQS 181
           QPL +DF LTPNHTLRRLIQAWC  NA NGVDRIPTPK+PL+  H++KL++DL   QL  
Sbjct: 59  QPLERDFVLTPNHTLRRLIQAWCADNATNGVDRIPTPKTPLDRTHVVKLIRDLGVAQLYL 118

Query: 182 KALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDGVREALNVLSIISIPIA 361
           K L+++ +L  +NERNR CM +AG AKA+V +II C+K+N   GV E L +L +I  P +
Sbjct: 119 KTLQKMEALTRDNERNRNCMADAGAAKAIVLLIIKCFKENKTTGVEEGLRILHLIWSPTS 178

Query: 362 EINLFI---YDFFDSIAWVLRRGKANHV 436
           E+ L +   YDF D++ W L     N+V
Sbjct: 179 EMKLLLKENYDFVDAVTWALGCETDNYV 206


>emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]
          Length = 437

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/148 (52%), Positives = 104/148 (70%), Gaps = 3/148 (2%)
 Frame = +2

Query: 2   QPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQS 181
           QPL +DF LTPNHTLRRLIQAWC  NA NGVD+IPTPK+PL+  H++KL++DL   QL  
Sbjct: 59  QPLERDFVLTPNHTLRRLIQAWCAANATNGVDQIPTPKTPLDRTHVVKLIRDLGVAQLYL 118

Query: 182 KALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDGVREALNVLSIISIPIA 361
           K L+++ +L  +NERNR CM +AG AKA+V +II C+K+N   GV E L +L +I  P +
Sbjct: 119 KTLQKMEALTRDNERNRNCMADAGAAKAIVLLIIKCFKENKTTGVEEGLRILHLIWSPTS 178

Query: 362 EINLFI---YDFFDSIAWVLRRGKANHV 436
           E+ L +   YDF D++ W L     N+V
Sbjct: 179 EMKLLLKENYDFVDAVTWALGCETDNYV 206


>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223536623|gb|EEF38265.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 403

 Score =  161 bits (408), Expect = 4e-38
 Identities = 78/141 (55%), Positives = 103/141 (73%), Gaps = 3/141 (2%)
 Frame = +2

Query: 2   QPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQS 181
           Q LPKDFDLTPNHTLRRLIQAWC+ NA++G+DRIPTPK  L+  H+LKL++DL  P+LQ 
Sbjct: 53  QSLPKDFDLTPNHTLRRLIQAWCIDNASSGIDRIPTPKPCLDKFHLLKLIKDLHLPRLQM 112

Query: 182 KALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDGVREALNVLSIISIPIA 361
           K L +L  LAAEN+RNRK M E GV KA++  I+ C+KK   DG++EA+++L +I IP  
Sbjct: 113 KTLVQLELLAAENDRNRKYMAETGVPKALLLFIVTCFKKGRFDGIQEAVSILRLIRIPPQ 172

Query: 362 EINLFIYD---FFDSIAWVLR 415
           E    + +     +S+ WVLR
Sbjct: 173 ESRALLSENDQIIESLTWVLR 193


>ref|XP_002513722.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223547173|gb|EEF48669.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 347

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/148 (54%), Positives = 101/148 (68%), Gaps = 3/148 (2%)
 Frame = +2

Query: 2   QPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQS 181
           QPLP+D DLTPNH L RLIQAWC  NA NG+D IPTPK  L+  ++LKL++DL  P L  
Sbjct: 55  QPLPRDADLTPNHMLLRLIQAWCTANAKNGIDPIPTPKPSLSKTYVLKLVKDLQVPYLCV 114

Query: 182 KALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDGVREALNVLSIISIPIA 361
           +AL+++ +LA ENERNR CMMEAGVAK +V  +I C+K+ +I G+ EAL +L +      
Sbjct: 115 QALKKMEALATENERNRACMMEAGVAKGLVPFVIRCFKERMIKGIEEALKILDLTWNSSE 174

Query: 362 EINLFI---YDFFDSIAWVLRRGKANHV 436
           EI L I   YDF DS+ WV      NHV
Sbjct: 175 EIKLLIKDNYDFIDSLIWVSGCNMDNHV 202


>ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|222854300|gb|EEE91847.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/141 (56%), Positives = 102/141 (72%), Gaps = 4/141 (2%)
 Frame = +2

Query: 2   QPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQS 181
           QPL KD DLTPNHTLRRLIQAWC  NA++GVDRIPTPK  L+  H+LKL+++L   +LQ 
Sbjct: 53  QPLQKDLDLTPNHTLRRLIQAWCTENASHGVDRIPTPKPCLDKAHVLKLIKNLSHHELQI 112

Query: 182 KALRRLVSLAAENERNRKCMMEAGVAKAMVSMIIACYKKNVIDGVREALNVLSIISIPIA 361
           K L RL  LAAENERNRKCM++AG+ KAM+  I AC+KK  + G++EAL++L  I IP +
Sbjct: 113 KTLTRLELLAAENERNRKCMVDAGLPKAMLLFIAACFKKGQVSGIQEALSILCFIRIPRS 172

Query: 362 EINLFIYD----FFDSIAWVL 412
           E   F  +      +S+ WVL
Sbjct: 173 ESRAFYSENDDKIIESLTWVL 193


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