BLASTX nr result
ID: Coptis25_contig00041182
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041182 (390 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22422.1| unknown [Picea sitchensis] 198 4e-49 ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrat... 197 7e-49 ref|NP_001237664.1| uncharacterized protein LOC100527036 [Glycin... 197 7e-49 ref|XP_004136500.1| PREDICTED: 40S ribosomal protein S17-like [C... 196 1e-48 gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis] 196 2e-48 >gb|ABK22422.1| unknown [Picea sitchensis] Length = 145 Score = 198 bits (503), Expect = 4e-49 Identities = 98/111 (88%), Positives = 107/111 (96%) Frame = +1 Query: 1 KTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKRIQRGPV 180 KTVKKSSRQV+ERYYSRMTLDFHTNKK+++EV+IIPSKRLRNKIAGFSTHLMKRIQRGPV Sbjct: 7 KTVKKSSRQVLERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKRIQRGPV 66 Query: 181 RGISLKLQEEERERRMDYVPDESAIDIDHIKVDKDTLDMLASLGFNDLPGV 333 RGISLKLQEEERERRMD+VPDESAI ID I+VDK+T+DMLASLG DLPGV Sbjct: 67 RGISLKLQEEERERRMDFVPDESAIKIDVIEVDKETMDMLASLGMADLPGV 117 >ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata] gi|297317044|gb|EFH47466.1| 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata] Length = 139 Score = 197 bits (501), Expect = 7e-49 Identities = 96/111 (86%), Positives = 108/111 (97%) Frame = +1 Query: 1 KTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKRIQRGPV 180 KTVKKSSRQVIE+YYSRMTLDFHTNKK+++EV+IIPSKRLRNKIAGFSTHLMKRIQ+GPV Sbjct: 7 KTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPV 66 Query: 181 RGISLKLQEEERERRMDYVPDESAIDIDHIKVDKDTLDMLASLGFNDLPGV 333 RGISLKLQEEERERRMD+VPDESAI DHI+VDK+TL+MLASLG ++LPGV Sbjct: 67 RGISLKLQEEERERRMDFVPDESAIKTDHIEVDKETLEMLASLGMSELPGV 117 >ref|NP_001237664.1| uncharacterized protein LOC100527036 [Glycine max] gi|255631414|gb|ACU16074.1| unknown [Glycine max] Length = 135 Score = 197 bits (501), Expect = 7e-49 Identities = 96/111 (86%), Positives = 107/111 (96%) Frame = +1 Query: 1 KTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKRIQRGPV 180 KTVKKSSRQVIERYYSRMTLDFHTNKK+++EV+IIPSKRLRNKIAGFSTHLMKRIQ+GPV Sbjct: 7 KTVKKSSRQVIERYYSRMTLDFHTNKKLLEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPV 66 Query: 181 RGISLKLQEEERERRMDYVPDESAIDIDHIKVDKDTLDMLASLGFNDLPGV 333 RGISLKLQEEERERRMD+VPD SAI+ DHI+VDK+TLDML SLG ND+PG+ Sbjct: 67 RGISLKLQEEERERRMDFVPDVSAINTDHIEVDKETLDMLHSLGINDIPGI 117 >ref|XP_004136500.1| PREDICTED: 40S ribosomal protein S17-like [Cucumis sativus] gi|449515869|ref|XP_004164970.1| PREDICTED: 40S ribosomal protein S17-like [Cucumis sativus] Length = 139 Score = 196 bits (499), Expect = 1e-48 Identities = 99/133 (74%), Positives = 115/133 (86%), Gaps = 9/133 (6%) Frame = +1 Query: 1 KTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKRIQRGPV 180 KTVKKSSRQVIERYYSRMT+DFHTNKK+++EV+IIPSKRLRNKIAGFSTHLMKRIQ+GPV Sbjct: 7 KTVKKSSRQVIERYYSRMTIDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPV 66 Query: 181 RGISLKLQEEERERRMDYVPDESAIDIDHIKVDKDTLDMLASLGFNDLPGV--------- 333 RGISLKLQEEERERRMD+VPD SAI + I+VDK+TLDML++LG ND+PG+ Sbjct: 67 RGISLKLQEEERERRMDFVPDVSAIKTEQIEVDKETLDMLSALGMNDIPGLVQVDPTVPQ 126 Query: 334 EVGDGMDFGGRRY 372 +VG G+ GRRY Sbjct: 127 QVGFGLGGRGRRY 139 >gb|AEC10963.1| 40S ribosomal protein s17 [Camellia sinensis] Length = 149 Score = 196 bits (498), Expect = 2e-48 Identities = 94/111 (84%), Positives = 108/111 (97%) Frame = +1 Query: 1 KTVKKSSRQVIERYYSRMTLDFHTNKKVIQEVSIIPSKRLRNKIAGFSTHLMKRIQRGPV 180 KTVKKSSRQVIERYYS+MTLDFHTNKK+++EV+IIPSKRLRNKIAGFSTHLMKRIQ+GPV Sbjct: 7 KTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPV 66 Query: 181 RGISLKLQEEERERRMDYVPDESAIDIDHIKVDKDTLDMLASLGFNDLPGV 333 RGISLKLQEEERERRMD+VPDESAI DHI+VDK+T+D+LASLG +++PGV Sbjct: 67 RGISLKLQEEERERRMDFVPDESAIKTDHIEVDKETIDLLASLGMSEMPGV 117