BLASTX nr result

ID: Coptis25_contig00041181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041181
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 95   5e-18
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    59   1e-15
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]    61   1e-14
emb|CAN76151.1| hypothetical protein VITISV_012673 [Vitis vinifera]    59   1e-14
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    84   2e-14

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
 Frame = +3

Query: 102  CWLAMD------KDIASGKMFFQGQTENGLYPLHFS-----SQCLSSPTAFLSNKASSST 248
            C+L  D      KD+++GKM FQG +E GLYP +++     S    SPTA +  KA   T
Sbjct: 672  CYLTFDPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHT 731

Query: 249  WHGRLGHPAALILHKLIHEKCIDV-NLNSNKSFCTDCAISKITKLPLTLSSCKSTEPLQL 425
            WH RLGHP+   LH ++H+  + V    +N S CT C + K  +L  +   C S+ PLQL
Sbjct: 732  WHRRLGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQL 791

Query: 426  LHMDL 440
            LH D+
Sbjct: 792  LHTDV 796


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 58.9 bits (141), Expect(2) = 1e-15
 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
 Frame = +3

Query: 114 MDKDIASGKMFFQGQTENGLYPLHFSSQ-----CLSSPTAFLSNKASS-----STWHGRL 263
           + KD  +  +  QG+ ENGLY     S       +++ +AF S+ +S+       WH RL
Sbjct: 251 LKKDRHTKMVLAQGKLENGLYKFPVFSNKKPYSSVNNASAFHSHFSSTIENKAELWHNRL 310

Query: 264 GHPAALILHKLIHEKCIDVNLNSNKSFCTDCAISKITKLPLTLSSCKSTEPLQLLHMDL 440
           GH A+ I+ K+++  C   +     + C+DC ++K  +LP  LS+ ++++PL+L++ D+
Sbjct: 311 GHVASDIVSKVMNT-CNVASGKYKSTVCSDCQLAKSHRLPTQLSNFRASKPLELVYTDI 368



 Score = 48.5 bits (114), Expect(2) = 1e-15
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = +2

Query: 5   DSCWYANTGASNHLTANINNLAAHTDYKGSDKVLVGNGQGHSI 133
           D  WY ++GAS+HLT N+ NL + + Y G+D+V +GN +  SI
Sbjct: 192 DESWYLDSGASHHLTQNLGNLTSTSPYTGTDRVTIGNXKHLSI 234


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score = 60.8 bits (146), Expect(2) = 1e-14
 Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +3

Query: 129 ASGKMFFQGQTENGLYPLHFSSQCLSSP--TAFLSNKASSSTWHGRLGHPAALILHKLIH 302
           ++G +  +G  ENG+Y    S    S+P   A++  + S + WH RLGHP+  ++  L++
Sbjct: 373 STGAILLRGACENGVYIFPNSMMAPSTPKMVAYVHERTSINGWHKRLGHPSIKVVQNLVN 432

Query: 303 EKCIDVNLNSNKSFCTDCAISKITKLPLTLSSCKSTEPLQLLHMDL 440
              + +  N     C  C+I+K  + P   +S +S  PL++++ D+
Sbjct: 433 LFSLPLTTNKLPLSCPSCSINKAHQQPFGSTSFQSHSPLEIIYSDV 478



 Score = 43.5 bits (101), Expect(2) = 1e-14
 Identities = 16/37 (43%), Positives = 29/37 (78%)
 Frame = +2

Query: 14  WYANTGASNHLTANINNLAAHTDYKGSDKVLVGNGQG 124
           W  ++ AS+++T +I NL+ H++Y G+D+VL+G+G G
Sbjct: 332 WLIDSAASHNITGDIKNLSIHSEYDGTDEVLLGDGTG 368


>emb|CAN76151.1| hypothetical protein VITISV_012673 [Vitis vinifera]
          Length = 979

 Score = 59.3 bits (142), Expect(2) = 1e-14
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
 Frame = +3

Query: 120 KDIASGKMFFQGQTENGLYPLHFSSQCLSSPTAF-----LSNKASSSTWHGRLGHPAALI 284
           KD  +  +F QG+ E G Y +  +++ +  P AF     +S+  S    H RLGH    +
Sbjct: 207 KDQKTRLVFLQGKNEKGFYKIPAATRVVGHPLAFYATSSISDAGSLRLLHNRLGHLFVDV 266

Query: 285 LHKLIHEKCIDVNLNSNKSFCTDCAISKITKLPLTLSSCKSTEPLQLLHMDL 440
           + K++    I +  ++N S C  C ++K  +LP   S+ ++ +P  L+++DL
Sbjct: 267 VSKILSLCKIPLKHDNNNSICESCQLAKSHRLPFQRSTSRAIKPFGLIYVDL 318



 Score = 44.7 bits (104), Expect(2) = 1e-14
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = +2

Query: 5   DSCWYANTGASNHLTANINNLAAHTDYKGSDKVLVGNGQG 124
           D+ W+ + GA++HL +++NNL  H  +   DKV+VG+  G
Sbjct: 155 DTSWFLDAGATHHLISDLNNLTIHNPFTSGDKVIVGDDNG 194


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
 Frame = +3

Query: 120 KDIASGKMFFQGQTENGLYPL------HFSSQCLSSPTAFLSNKASSSTWHGRLGHPAAL 281
           K+  +G++  QG  ENGLYPL      H S  CLS+    +  +A++ TWH RLGHP+++
Sbjct: 414 KENLTGRILLQGVVENGLYPLAGCKTFHKSLTCLSTT---IGVRANADTWHSRLGHPSSV 470

Query: 282 ILHKLIHEKCIDVNLNSNK-SFCTDCAISKITKLPLTLSSCKSTEPLQLLHMDL 440
           I + L H   + V  +S K  FC+ C + K  +LP   SS +S+ PL L+H D+
Sbjct: 471 IFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSDV 524


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