BLASTX nr result

ID: Coptis25_contig00041172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041172
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64031.1| hypothetical protein VITISV_037889 [Vitis vinifera]    71   8e-11
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]    71   8e-11
emb|CAN69756.1| hypothetical protein VITISV_008645 [Vitis vinifera]    71   1e-10
emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera]    69   3e-10
emb|CAN72143.1| hypothetical protein VITISV_036307 [Vitis vinifera]    68   7e-10

>emb|CAN64031.1| hypothetical protein VITISV_037889 [Vitis vinifera]
          Length = 2193

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3    GDKALGPDGFLISFFKTS*HFVRSDVRRIWRN--VMTILLDWRINTTLTLIPLKEGVEDL 176
            GDKA GPDGF ++F+++   F++ ++  ++++  V +  L    NT L L+P K G EDL
Sbjct: 1059 GDKAPGPDGFTMAFWQSCWEFIKEEILEMFKDFYVHSSFLXSLNNTFLVLLPKKSGAEDL 1118

Query: 177  KDYKLISLLGQRTISLLGQCTR*IPRFIV*R--EVMGSISSNFQNAFLRKRQILDCCL 344
            +D+        R ISLLG   + + + +  R  +V+G + S  QNAF++ RQILD  L
Sbjct: 1119 RDF--------RPISLLGGLYKLLAKVLANRLKKVVGKVVSTSQNAFVKGRQILDASL 1168


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3   GDKALGPDGFLISFFKTS*HFVRSDVRRIWRNVMTILLDWRIN--TTLTLIPLKEGVEDL 176
           GDKA GPDGF ++F+KT    V  +V +++  + +  + +R +  T L LIP KEG  D+
Sbjct: 433 GDKAPGPDGFTLAFWKTCXPVVGGEVMQVFEELHSQNVIFRSHNATFLVLIPKKEGXSDV 492

Query: 177 KDYKLISLLGQRTISLLGQCTR*IPRFIV*R--EVMGSISSNFQNAFLRKRQILDCCL 344
           +DY        R ISL+G   + I + +  R   VMG + SN QNAF+  RQILD  L
Sbjct: 493 QDY--------RPISLVGSLYKIIAKVLANRLKGVMGKLVSNSQNAFVEGRQILDAVL 542


>emb|CAN69756.1| hypothetical protein VITISV_008645 [Vitis vinifera]
          Length = 1196

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3    GDKALGPDGFLISFFKTS*HFVRSDVRRIWRNVM--TILLDWRINTTLTLIPLKEGVEDL 176
            GDKA GPDGF ++F+++   F++ ++  ++++    +  L    NT L LIP K G EDL
Sbjct: 956  GDKAPGPDGFTMAFWQSCXEFIKEEILEMFKDFYDHSXFLKSLNNTFLVLIPKKSGAEDL 1015

Query: 177  KDYKLISLLGQRTISLLGQCTR*IPRFIV*R--EVMGSISSNFQNAFLRKRQILDCCL 344
            +D+        R ISLLG   + + + +  R  +V+G + S  QNAF++ RQILD  L
Sbjct: 1016 RDF--------RPISLLGGLYKLLAKVLANRLKKVVGKVVSTSQNAFVKGRQILDASL 1065


>emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera]
          Length = 1832

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3    GDKALGPDGFLISFFKTS*HFVRSDVRRIWRNVM--TILLDWRINTTLTLIPLKEGVEDL 176
            GDKA GPDGF ++F+++   F++  +  +++     +  L    NT L LIP K G EDL
Sbjct: 1314 GDKAPGPDGFTLAFWQSCWEFIKEKIIEMFKEFYDHSSFLKSLNNTFLVLIPKKCGAEDL 1373

Query: 177  KDYKLISLLGQRTISLLGQCTR*IPRFIV*REVMGSISSNFQNAFLRKRQILDCCL 344
             D++ ISLLG     L       + R      V+G + SN QNAF+R RQILD  L
Sbjct: 1374 GDFRPISLLGGLYKLLAKVLANRLKR------VVGKVVSNSQNAFVRGRQILDASL 1423


>emb|CAN72143.1| hypothetical protein VITISV_036307 [Vitis vinifera]
          Length = 781

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   GDKALGPDGFLISFFKTS*HFVRSDVRRIWRNV--MTILLDWRINTTLTLIPLKEGVEDL 176
           GDKA GPDGF ++F++    FV+ +V  +++        L    NT L L+P K GVE+L
Sbjct: 82  GDKAPGPDGFTVAFWQCYWEFVKEEVLEMFKEFHEQNAFLKSLNNTFLVLLPKKGGVEEL 141

Query: 177 KDYKLISLLGQRTISLLGQCTR*IPRFIV*REVMGSISSNFQNAFLRKRQILDCCL 344
            D++ ISLLG     L       I      + V+G + S +QNAF+  RQILD  L
Sbjct: 142 GDFRPISLLGGLYKLLAKVLANRI------KNVIGKVVSPYQNAFIMGRQILDASL 191


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