BLASTX nr result

ID: Coptis25_contig00041165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041165
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635079.1| PREDICTED: uncharacterized protein LOC100852...    69   4e-10
ref|XP_003549950.1| PREDICTED: uncharacterized protein LOC100781...    63   2e-08
ref|XP_002524361.1| conserved hypothetical protein [Ricinus comm...    58   9e-07

>ref|XP_003635079.1| PREDICTED: uncharacterized protein LOC100852443 [Vitis vinifera]
           gi|297745672|emb|CBI40926.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
 Frame = +2

Query: 140 IMRRGACCGEKAVLVTVFVERPTRRRVSSNHHPNKIHHPITQAVIRNRG-------GGRG 298
           + ++   C +KAVLVT++VE+P +R    NHH +  HH +    I+  G        GRG
Sbjct: 2   VTKKATSCKDKAVLVTLYVEKPRKR---INHHHHHHHHHLLYHTIKGEGFQQNYGADGRG 58

Query: 299 YDRKAELLRYSHCLRESARSTSTTPLHRPAAVASSQVHNQRPTTK 433
           Y R+A LL YS  LRESA+S ++  L+ P A++S    +Q+P  K
Sbjct: 59  YSRRALLLHYSQSLRESAQSAASASLN-PKAISSK---DQQPINK 99


>ref|XP_003549950.1| PREDICTED: uncharacterized protein LOC100781097 [Glycine max]
          Length = 173

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
 Frame = +2

Query: 161 CGEKAVLVTVFVERPTRRRVSSNHHPN---KIHHPITQAVIRNRGGGRGYDRKAELLRYS 331
           C +KAVLV V+VE+P ++  SS  H +    I H I Q V+   G    Y R+A LL YS
Sbjct: 9   CNDKAVLVKVYVEKPRKKSSSSIQHQHLHYHIRHTIRQEVVLGSGSKGSYARRAGLLMYS 68

Query: 332 HCLRESARSTSTTP 373
           H LRESA+   +TP
Sbjct: 69  HLLRESAKGALSTP 82


>ref|XP_002524361.1| conserved hypothetical protein [Ricinus communis]
           gi|223536322|gb|EEF37972.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 192

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 19/94 (20%)
 Frame = +2

Query: 161 CGEKAVLVTVFVERPTRRRVSSNHHPNKIHH---------PITQAVIRNRGG-----GRG 298
           C +K V+++V+VE+PT+R+V+S  H +  HH          I Q V  N+ G     G+G
Sbjct: 12  CKKKVVVISVYVEKPTKRKVTSKSHRHHHHHHHCHYYNHQNIKQEVTANKYGDSINAGKG 71

Query: 299 YDRKAELLRYSHCLRESA-----RSTSTTPLHRP 385
           + R+A+LL YS  LRESA      S+   P+ +P
Sbjct: 72  FSRRAQLLLYSQRLRESADHRPVESSHLDPIPKP 105


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