BLASTX nr result

ID: Coptis25_contig00041142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041142
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vini...    64   2e-08
emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]    64   2e-08
ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vini...    62   5e-08
emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]    62   5e-08
ref|XP_002315778.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737032|emb|CBI26233.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = -3

Query: 138 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDK 4
           HSQ HPLD LTP EF Q+Q I+K S P    N++F YVGLD+PDK
Sbjct: 19  HSQYHPLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDK 63


>emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]
          Length = 654

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = -3

Query: 138 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDK 4
           HSQ HPLD LTP EF Q+Q I+K S P    N++F YVGLD+PDK
Sbjct: 19  HSQYHPLDSLTPSEFHQVQAIVKGSNPGSSLNMTFQYVGLDEPDK 63


>ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737034|emb|CBI26235.3| unnamed protein product
           [Vitis vinifera]
          Length = 674

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = -3

Query: 138 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDK 4
           HS  HPLD LTP EF Q+Q I+  S P   +N++F YVGLD+PDK
Sbjct: 24  HSHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDK 68


>emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]
          Length = 644

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = -3

Query: 138 HSQSHPLDPLTPKEFIQIQTIIKQSQPDPIYNISFHYVGLDDPDK 4
           HS  HPLD LTP EF Q+Q I+  S P   +N++F YVGLD+PDK
Sbjct: 24  HSHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDK 68


>ref|XP_002315778.1| predicted protein [Populus trichocarpa] gi|222864818|gb|EEF01949.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -3

Query: 126 HPLDPLTPKEFIQIQTIIKQS-QPDPIYNISFHYVGLDDPDK 4
           HPLDPL+PKE   +QTI+K+S  P    NISFHYVGLD+P+K
Sbjct: 25  HPLDPLSPKELTLVQTIVKKSYNPSSNNNISFHYVGLDEPEK 66


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