BLASTX nr result

ID: Coptis25_contig00041141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041141
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33744.1| unknown [Lotus japonicus]                               56   4e-06

>gb|AFK33744.1| unknown [Lotus japonicus]
          Length = 151

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
 Frame = +1

Query: 10  LEDEGILGAELSQLRV----KNPDGLEFVLELMEMYGTLVQENIDLLNKHLKEA--DFHE 171
           L DEG L  + +QL +     NPD   FV+E++ ++    +  +D L K L +A  DF +
Sbjct: 19  LFDEGFLDEQFNQLELLQDESNPD---FVVEVVTLFFQDAERLLDELTKALGQASIDFKK 75

Query: 172 VTKCVHLIKGYSMACGTKKVFSACLAYRQAYDQKDMERC 288
           +   VH +KG S + G ++V  AC+++R + ++K++E C
Sbjct: 76  LDAHVHQLKGSSSSVGAQRVHKACISFRNSCEEKNIEGC 114


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